| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1800 |
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| Symbol | |
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| ID | 8384088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1805633 |
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| End bp | 1806301 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644972868 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_003130705 |
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| Protein GI | 257052872 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.434291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGCCT GCTGTACGTT CGACGCCGAT CTGTTGGGCC CGACGTTCGA GGAGCACGCC
GAGCTGTCGG TCACTGTCGA AGGAATCGAC GCCGGGCGGG CGGTCCCACT CCGCCTCGTC
TTCTGGGCCC ACGGTGTTTC CCCGGCGAAA CTCGATGCGA CGCTTCGGTC GGACCGGACC
GTGGCGACGG TCGACCGGCT CTCGACGACG CCGTCCGGAA CGCTGTACCG GTCGATTCAC
CACGCAGGCC TCCCGTCGGT CGCCGTCTAC AACGCCGCGA TCGAGCACGA CGCGCTGGTG
CTCGCGGCGA CGAGCGACGG CGATGGCTGG AACGTGCGAC TGCGGATCCC TGATCGGGAA
GAGCTGTCGA TGCTATGTGA CCGATGTGAA CAGCTCGGTA TCGGCGTCTC CGTGGTCTCG
ATCAGGGATC GGGATGCAGC CACCCTCGAC GACGAGTTCG GGCTTACGAC CTCCCAGCGG
GAGCTGCTCT CGCTCGCCTG GGATCGCGGC TACTTCTCGA TCCCCCGGGA CACGTCACTG
TCTGAACTCG CTTGTGAACT CGAAATCTCA CAACAGGCCG CCTCCGAACG ACTCCGCCGT
GGCCTCTGGA AGCTCGTCTC GAACACGGTC TGTGAAGACG ACACAAACGA AGACTGTGGG
TCGTGTTGA
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| Protein sequence | MIACCTFDAD LLGPTFEEHA ELSVTVEGID AGRAVPLRLV FWAHGVSPAK LDATLRSDRT
VATVDRLSTT PSGTLYRSIH HAGLPSVAVY NAAIEHDALV LAATSDGDGW NVRLRIPDRE
ELSMLCDRCE QLGIGVSVVS IRDRDAATLD DEFGLTTSQR ELLSLAWDRG YFSIPRDTSL
SELACELEIS QQAASERLRR GLWKLVSNTV CEDDTNEDCG SC
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