| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1742 |
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| Symbol | |
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| ID | 8384028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1751119 |
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| End bp | 1752771 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644972808 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003130647 |
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| Protein GI | 257052814 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCTCT ATACGGCACT CCGGCTCGGA ACGACAACGT TCGCGGCACT GGTAGCCGTC
GCGCTGGTGG TGGTTCTGCT CCGGTATCGT GATCGGGCCA GCGCCCGGGC ACTGCTCGGT
GTCGGGGTGT TCACAAGCGT GGGATCGCTC TTGCACCTGC TTGTGGCCGA TCTCACATCG
CCGAACGCAG CGATCGCAGT GACCGGCTGG GATGTCGAGG CGTCGGCGTG GGTCGTGATC
GGCACGACCA CCACAGTGAT CGCCGGCGGG CTGTGGGTAC TGTTCGCCTT TCGATACACG
GGTCGATCCC GGCGGGTGGT CCAGGCGACC GGCGCGATCA TAGGCGCGAT CTCGATCGGT
GCCGTCATGA CCGCGGCACT GGCGGTCAGG GATCCGTCCC CCCTCACATT CCAATTGCTG
ACGGTGACGT TCCTCCTCAT GGGATTTCTC GTCACGATCG GGGTATTTTT GCTCCTGTGG
ACGTCGATCG ACCAGCAAGC AGTCCCGCTC CGTGAGCCGT TGTTGCTAGC AGGTGGCGCG
ATCGTATTGT TGTCCGGAAG TTTCGTCGCA CAGATCTTCG AACGACCAGT CATCCGCCCG
GCACTGACGG CGATCGCCGG CGGCTTGTTT CTGTTCGCCG TTGTCCGGTA TCCGGTTTTC
GAAACGCCAC CCGCCGTACG GGTGCTCGGG CGGGATCGCG TCGTCGGTGA ACTGGCTGAC
GGAATCCTCA TCGTCGATCG GAGCGGGCGG GTTCGAGACC TCAATCCCGC CGGCGAACGG
CTGTTCGATG TCTCGCGGGC ATCGGTCCTC GAAGAAGCGT TCGAGTCACT GTTTCCCACC
GCGATCAGTC TCACGGACGT GGCGAAGAGA GCGGACCCAA TTCGGATCGA ACTGCCGGAC
GGAACGACGG TGTCCGTGAC CGCCGATCCG GTCACTGACG GACGGGGTCG TCAAGTCGGC
CACCTGATAA CCTGTACGGA CGTGACCGCC CGACAGCGGA GGGAGGAACA GCTCACGTTG
CTCAGTCGCT TCGTCGTCGA GGTGATTCAG GGACGAATGA CTGCCGTGGC CGACGAGGTA
ACAGAGATAG AAAACACGTC GTTCGACGAC GCTCCGGAGG TCGCCGGTCG GATGTGGGAG
CGAACGACGC AGCTGACGAC ACTCGTCGCC CAGACGCGCT CGATCGAGCG AGCTATCGCC
GAGAACGGGG TCCGCCCGGA CGAGCGACTT GCTGTCGGCG CCGTCCTCCG GGAACTCCGC
GATTCGATCA CTACCGAAGC AGGCCCGAAG ATGGCGGTCG ATACCCCAGC GGACGCTATC
GACACGGCTG TCAACTCGGC GCTCCTGGCG TCGCTGCTCG AACCAGTGCT CGAAGACGCG
TGCGCCCATG CTGTGACGCA GGTCGAAGTC ACCGTCGAAA CTGACCCCCC GACGGTTCGG
ATCATCGACG ACCGACCGGA CGTCAACGAT CGCGCAGAGA AGGGGTCCGA CGCCGACCTC
TCGCTTGCGG TTTCGCGCCT GGCACTCGAC CAACTCGGGG GCCATCTTTC CGTCGAGCGG
ACCTCGGAGG GACGACGGGC GGTTGTCGTC GTCCTCCCGT CGGGTGACAC GCGGGAAACG
GACCGACCAC ACACAACAGG GGGTGACGCG TGA
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| Protein sequence | MVLYTALRLG TTTFAALVAV ALVVVLLRYR DRASARALLG VGVFTSVGSL LHLLVADLTS
PNAAIAVTGW DVEASAWVVI GTTTTVIAGG LWVLFAFRYT GRSRRVVQAT GAIIGAISIG
AVMTAALAVR DPSPLTFQLL TVTFLLMGFL VTIGVFLLLW TSIDQQAVPL REPLLLAGGA
IVLLSGSFVA QIFERPVIRP ALTAIAGGLF LFAVVRYPVF ETPPAVRVLG RDRVVGELAD
GILIVDRSGR VRDLNPAGER LFDVSRASVL EEAFESLFPT AISLTDVAKR ADPIRIELPD
GTTVSVTADP VTDGRGRQVG HLITCTDVTA RQRREEQLTL LSRFVVEVIQ GRMTAVADEV
TEIENTSFDD APEVAGRMWE RTTQLTTLVA QTRSIERAIA ENGVRPDERL AVGAVLRELR
DSITTEAGPK MAVDTPADAI DTAVNSALLA SLLEPVLEDA CAHAVTQVEV TVETDPPTVR
IIDDRPDVND RAEKGSDADL SLAVSRLALD QLGGHLSVER TSEGRRAVVV VLPSGDTRET
DRPHTTGGDA
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