Gene Huta_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1730 
Symbol 
ID8384016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1739270 
End bp1742020 
Gene Length2751 bp 
Protein Length916 aa 
Translation table11 
GC content62% 
IMG OID644972796 
ProductUvrD/REP helicase 
Protein accessionYP_003130635 
Protein GI257052802 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACCG TCGGGACAAA CGAAATCGAA TCGGTCGATG AGCCGTCACT GCCGGTTCGT 
CTGTTCCGTC GGTATGCCCC CGATCCCCTC GTTCGATTGT GGCTCGGCGA TCCGGACGAA
CGACGCCGCA AATTCGAATC AGCACTTGCG ACTCTCGAAG ACGAACTCGC TTCTCTGAAC
GAGGAACAAA CGGCGCTTCT CGACGGTGAA CACTACTTGA CGACGCGGGA ACGACGCGGG
TTCTCCGAAA GCCTTCAGCG TGCGATCGAC GAGTACGACG AACTTCGATC GACGACGTGG
CCGTTCCCCT ATTCGAGCAA CGACCGCGAT CGGTTGGACT CGATCAGATC GGAGCTACAG
GGAATCACTG CACGTCTCGA CGGATACAAC GAGGAGTTCG TGGAGCGACA GCTGGAGCAG
TACGAGAACC TCTTCACGGA TATCGACGAG GCAGACCACG ACCTGAATCG CGACCAGCGA
AAAGCGGTCG TCCGGAACGA TGAGTACAAT CAGGTCATCG CCGGTGCGGG GACCGGCAAG
ACACTCGTCC TCACGCACCG GATCGCCTAC CAGATCGAAC GCGGTGTCGA TCCGGATCGG
ATTGCCGCCG TCACACTCAC CCGAAACGCC AGAGACGAGA TTCAGAAGCG CCTCGACGAG
CGCTTCGGCA TTACCGAGGT CACCGTGGAA ACCTTCCACA GTTTCGCAAA TGGGATCGCA
CGCCAGGCCA CGGACGGGCA TCGCTCGACG ATCGACGATC GCGACCGTCG AAACTTCGTC
GAGGAACGGA TCCGCGACAA ACTCGATGGG GACGATGCCG CGTTCGCCCG GCACTATCGC
CAGTTTCTGA CCCACTACTC GACCGAGACG CCGGTCCCCA ACGATCACGA ATCGCGAGCC
GAGTACGTCC GGGCCCGGTC CGAACGGTCC TACGAGACGC TCGCCGGCGA AACGGTCGCA
TCGCAGGCCG AGAAGGCCAT CGCGGACTTC CTGTTCACGC ACGGCGTCGA GTATCAGTAC
GAGGCGATCG CCGAATGGGC CGAGACGGGC GAGGACAGGG ACGTTTACAG TCCGGATTTC
TCTCTGCCCG AATACGACAT TACCATCGAA CACTGGGGGA TCGACGAGAA CGGTGCCGTC
GCGCCGTGGT TTGCCTGGAC CAGCGAGGAG TACCGCGAGA AACTCGCGTG GGCACGCCAG
CAGTTCGCGT CGAGTGGCCA CACCCTGGTC GAAACCTACG ATTTCGAATA CTGGGCCGGC
ACTCTGGAGA AGGCCCTCAC CCATCGCCTC GCGAGACATG GCGTCCGACT GGATCCGATG
AGCTTCGACG ACCTCGTCGA TCACGCTCTC GACGACCACG AGCGAGAGCA ACACCTCATC
GGACTCTTCG CGAAGTTCAT CGACAACGCC GGGACCTTCG ATACCGATCC CGACGAGATC
CGAGCCGATC TGTCGCGGCA CGATCCCCGC GAGTATCACT TCGGTGTCTG TGGGTCCATC
CTCCTCGAGG AGTACGAAGA CTGGAAGCGA CGGAACGGTC TCGTGGACTT CGACGACATG
ATCTACGACG CCGTCGCGGC CGTTCGCGAG GACCCGGACC GCTTCCAGTC GCAGTTCGAG
CACGTCCTCG TCGACGAGTT CCAGGACGTC GCGATCAGTC AGATCAGACT GCTCGACGCG
CTGACCGACG GTCCCGACGC ACCGCACCTC TTCTGCGTCG GCGATGACTG GCAGAGCATC
TACGCGTTCC GTGGCGCTGT CGTCGAGTAT TTCGTGGACT TCGAGGAGTA CTTCGGGCCG
GCAGCGATCA CCGAACTCCG CGAGACCTAT CGCTGCCCGG CAACCGTCCT GGAGGCGAGC
ACGGACCTGA TCGCGAACAA TCCCACGCAG ATCGAGAAAA GTCCCGTGGC CTGCAGTGGC
CGGGAGACGA CACCACGGCT CCACGTGCTC GACGGGTACG ACGAGTGGCA GTATGCGGAC
CGGGTCGGCG AGTACGCGGC GACTCTCGTC GAGCAGTACC TGAACGAGGA CAGTGATCCA
GAGGACGTAA TGATCCTCTC GCGATACGAT AGTGGGGCGC CGTTCGTCGA TCAGGTCAAA
GAGGCGCTCG AAGCGCGGAG CATTCCCTAC GACGGCAAAG CAGACGGCGA CCGATATCGG
CCCGACGGTG CACCGGCTGG GAGCGGCGCT GGCGTGTCGG TCTTCTCCGC CCACCAGGCG
AAAGGGCGCG AGGCACCGCA CGTCATCCTC CTCCACGTTG CTCGGGGCGA GGACGGATTT
GCACCCGACG TCCGCAACAA CGAACTGCTG AACCCCGTCC GTGATGTCTC GGCGAACACC
GACGCCGAGG AGCGCCGCCT CTTCTACGTC GCCCTGACAC GCTCGGAAGC GACGCTCGAT
CTGCTGACGA AGGCGGGCGA GGAGTCCGGG TTTCTCGACG AAATCGATGC GTACCTCGCG
CGGAGTGAGA GCGTCGTCGA TCCCGGTGAG GTCGGCGACC GAGTGCGCAT CACTGCGACG
GTGGCCACGC TGTGGGACGA CCCGCACGAA AGTCAGGCAC AGGCGGGCTT GCTCGAAGAC
GAGAGTGGCA GAATTAAGTT CGTCTCGTGG GAGCGAACTG ACCCGCCAGT CGTGGCGGAG
GGAGCGACGT ACGTCTTCGA CGAGGTCGAA GTCAGCGAGT ACAACGGTGA TCGAGAGATC
CACTTCACGG AGGCAACGAC GATCCACGAA CGAGAGCCAG GGAATCAATG A
 
Protein sequence
MGTVGTNEIE SVDEPSLPVR LFRRYAPDPL VRLWLGDPDE RRRKFESALA TLEDELASLN 
EEQTALLDGE HYLTTRERRG FSESLQRAID EYDELRSTTW PFPYSSNDRD RLDSIRSELQ
GITARLDGYN EEFVERQLEQ YENLFTDIDE ADHDLNRDQR KAVVRNDEYN QVIAGAGTGK
TLVLTHRIAY QIERGVDPDR IAAVTLTRNA RDEIQKRLDE RFGITEVTVE TFHSFANGIA
RQATDGHRST IDDRDRRNFV EERIRDKLDG DDAAFARHYR QFLTHYSTET PVPNDHESRA
EYVRARSERS YETLAGETVA SQAEKAIADF LFTHGVEYQY EAIAEWAETG EDRDVYSPDF
SLPEYDITIE HWGIDENGAV APWFAWTSEE YREKLAWARQ QFASSGHTLV ETYDFEYWAG
TLEKALTHRL ARHGVRLDPM SFDDLVDHAL DDHEREQHLI GLFAKFIDNA GTFDTDPDEI
RADLSRHDPR EYHFGVCGSI LLEEYEDWKR RNGLVDFDDM IYDAVAAVRE DPDRFQSQFE
HVLVDEFQDV AISQIRLLDA LTDGPDAPHL FCVGDDWQSI YAFRGAVVEY FVDFEEYFGP
AAITELRETY RCPATVLEAS TDLIANNPTQ IEKSPVACSG RETTPRLHVL DGYDEWQYAD
RVGEYAATLV EQYLNEDSDP EDVMILSRYD SGAPFVDQVK EALEARSIPY DGKADGDRYR
PDGAPAGSGA GVSVFSAHQA KGREAPHVIL LHVARGEDGF APDVRNNELL NPVRDVSANT
DAEERRLFYV ALTRSEATLD LLTKAGEESG FLDEIDAYLA RSESVVDPGE VGDRVRITAT
VATLWDDPHE SQAQAGLLED ESGRIKFVSW ERTDPPVVAE GATYVFDEVE VSEYNGDREI
HFTEATTIHE REPGNQ