Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1720 |
Symbol | |
ID | 8384006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 1729104 |
End bp | 1730939 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644972787 |
Product | hypothetical protein |
Protein accession | YP_003130626 |
Protein GI | 257052793 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCTT GCACATTTTC CACAGGAGAT CTGCAAGCAC CAGACCACTC AAATAGTAAT GTATCCTTCC CGAAAGAGTG GTCCTGTCCG CATGAGGCTG TAGAGGGGCG GGAAAAATGC ATATTTCATC TAACATCGAA GGAACGGGAA AGGGACGACA TCTCAGACGA ATATGTAGCT AACCAAGCTC GGAAACTTGC TACAGAGAGA ACTGAGAAAG CAACGCTAAT TGGAGCGAAT CTCCCCGAGT TAGACTTAAG TGACACGATT GTTTCGAGTG AATCAGGTGG ATTGTTAGAT CTTCGGTTTT CATCGATTTC TGGTGAACTC AACTTCAACG ACACACTCGT CGAAATACCC GTCTCAGCAG TAGGTGCAGA ACTCACGGGC GGAATAGAGC TTCGAAACAC GACCTTTGAA AAAGAAGTCT CCTTCTATGG TTCACGCATC AAAAGTACAA TTGAAGGGAT GGCTGTGCAG TTTCAGGGGA GAGCAATCTT TGCTCGCATT TTGGCGTCAT ATTCTGTGAG ATTGCGTGAC AGTACCATTT TCGAGAAAAC AGCAACTTTT TCCCAACTTG AAATTAAAGG AAAACAAGGC TCTTTAGATC TTCGACGTGT ACTGGCTAAG GGCCCGTTCT ATGGACGTCA GATTGACGTT CCAAGATTTG ATTGCAGCGA AACAGTGTTT GAAGGATTTT TTGGACTACT CGGGGCACAT ATTCGAGGGG ACGCGAATTT CAGGGATTGT CATTTCAAGT CACTAACTAC TTTTGGAGAT GGTGATCGAA AACAGATTCC GGATAATACA GAAATAGAGG GGAGTGCGGA CTTTACTTCG GTGCTTGCCG ATCAGACACT CAGCTTTGAA AAAGTCAAAT TCAAAGGGGA ACTTGACTTC ACTGGTAGTT TCTTTGCTCG TATAGTGCGG CTTGAGTTAG TGACATTATA TGACGGTGTC AAGTTGAACC AATCTAAGTT CAAGGGGGGC CTCGAATTCA AACCACAGTA TACGACCTCT GAGGGAGACT ATTTCACCGT TACCGCAGCG GAAACGTCAA TATCTTCAGG GATACTTGCC CAACCGGGAC AGGCACAATC AGTCCCGATC CGTTTCGAAT TTGTCGATGC AAACCTGGGA GACGTCTCCT TCTATGAGAC AGAATTAGAG GGGGAACCGT TTTTGCTTGG AAATTATACC TACAAACCGT CCTCACTTGA TCATGTGAAG TTTGTGCGAA CTCGGTTTAC CGGATTTGAC TTCACATCAT ATCGGACGGC ATTTGAAGGG AACTGGACAT TGCATCGGTT TACAAATGCA AATGAAAATC GCCATCAATC AGATCTCGAT CCTGTCGATT TAGAATTGAC ATATATGTAT GGCAAGCAAG GTGCGAACAA CATTGGTGAT AACCTGGCTG CTGCAAAATT CTTCCAGAAA GAGATGGAAT ATCGCACGAA GAGATACCAT CCAGCCACGA AAAATATATA TGGAAATAGT TGGTTGAAGC ACGCCGGACT TCGATTATGG GGACTAACAA ACTTTTCAGA AAGTCCTACT CGAGTCTTTT CTTTGGGAGT GCTTCTAACC GTCGGCTTTG CAGCGTTGTA TGGGATTCTA TCATTTCTAG GGATTGCCAA CGCACCGTAT TCAAACGCGC CGCTTGGCAC CGGATATCTA ATTTTCAGTG CCGAATCTTT GATTACCTTG GTTCATGCCC CAGGGGCAAT TGTCAAAGCA TGGGAGATCC GTCTACTTTC CGTCTTTGAA GGGTTTCTTG GGGCCTTCCT GATAGCGCTC TTTGTATTTT CCCTAACTAG GGCGGTCCAC CGATAG
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Protein sequence | MSSCTFSTGD LQAPDHSNSN VSFPKEWSCP HEAVEGREKC IFHLTSKERE RDDISDEYVA NQARKLATER TEKATLIGAN LPELDLSDTI VSSESGGLLD LRFSSISGEL NFNDTLVEIP VSAVGAELTG GIELRNTTFE KEVSFYGSRI KSTIEGMAVQ FQGRAIFARI LASYSVRLRD STIFEKTATF SQLEIKGKQG SLDLRRVLAK GPFYGRQIDV PRFDCSETVF EGFFGLLGAH IRGDANFRDC HFKSLTTFGD GDRKQIPDNT EIEGSADFTS VLADQTLSFE KVKFKGELDF TGSFFARIVR LELVTLYDGV KLNQSKFKGG LEFKPQYTTS EGDYFTVTAA ETSISSGILA QPGQAQSVPI RFEFVDANLG DVSFYETELE GEPFLLGNYT YKPSSLDHVK FVRTRFTGFD FTSYRTAFEG NWTLHRFTNA NENRHQSDLD PVDLELTYMY GKQGANNIGD NLAAAKFFQK EMEYRTKRYH PATKNIYGNS WLKHAGLRLW GLTNFSESPT RVFSLGVLLT VGFAALYGIL SFLGIANAPY SNAPLGTGYL IFSAESLITL VHAPGAIVKA WEIRLLSVFE GFLGAFLIAL FVFSLTRAVH R
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