Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1712 |
Symbol | |
ID | 8383998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 1717729 |
End bp | 1718145 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644972779 |
Product | putative transcriptional regulator |
Protein accession | YP_003130618 |
Protein GI | 257052785 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.111866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAACAG TCCTTTCACG GCAAGAAAGC GAAGTTCTCG AATTCAAAGA ACAGCTGCCG AATCACCGTG ATAAAGTCGC TCAAGAAGTA GCCGCGCTCG CAAATAATGA AGGTGGGACC ATTCTGATCG GTGTTGATGA TTCCGGAACC CCAGTTGGTC TTGATTCTAT CGATCAGGTG GAAGAAACGG TAGCGAATGT TCTGAGCAAC GATCTCTCAA ACGTCATCCG AGACATTGAG AAAGCTCGCG TCGATGGAAC AGATATCCTT ATCATCAACG TGGACCGAGC AATTGAAGTT CCGGTTGACG TTGACGGGAC GTTCTTCGTA CGAACCGGAA CTACGACTGA CAGACTGACG GGGCGAGAAA TTCTGGATGG GTTCCCACGA GAAGTTGGAC GGCATGACGG GATTTAG
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Protein sequence | MKTVLSRQES EVLEFKEQLP NHRDKVAQEV AALANNEGGT ILIGVDDSGT PVGLDSIDQV EETVANVLSN DLSNVIRDIE KARVDGTDIL IINVDRAIEV PVDVDGTFFV RTGTTTDRLT GREILDGFPR EVGRHDGI
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