Gene Huta_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1712 
Symbol 
ID8383998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1717729 
End bp1718145 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content49% 
IMG OID644972779 
Productputative transcriptional regulator 
Protein accessionYP_003130618 
Protein GI257052785 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.111866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACAG TCCTTTCACG GCAAGAAAGC GAAGTTCTCG AATTCAAAGA ACAGCTGCCG 
AATCACCGTG ATAAAGTCGC TCAAGAAGTA GCCGCGCTCG CAAATAATGA AGGTGGGACC
ATTCTGATCG GTGTTGATGA TTCCGGAACC CCAGTTGGTC TTGATTCTAT CGATCAGGTG
GAAGAAACGG TAGCGAATGT TCTGAGCAAC GATCTCTCAA ACGTCATCCG AGACATTGAG
AAAGCTCGCG TCGATGGAAC AGATATCCTT ATCATCAACG TGGACCGAGC AATTGAAGTT
CCGGTTGACG TTGACGGGAC GTTCTTCGTA CGAACCGGAA CTACGACTGA CAGACTGACG
GGGCGAGAAA TTCTGGATGG GTTCCCACGA GAAGTTGGAC GGCATGACGG GATTTAG
 
Protein sequence
MKTVLSRQES EVLEFKEQLP NHRDKVAQEV AALANNEGGT ILIGVDDSGT PVGLDSIDQV 
EETVANVLSN DLSNVIRDIE KARVDGTDIL IINVDRAIEV PVDVDGTFFV RTGTTTDRLT
GREILDGFPR EVGRHDGI