| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1711 |
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| Symbol | |
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| ID | 8383997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1712412 |
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| End bp | 1717706 |
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| Gene Length | 5295 bp |
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| Protein Length | 1764 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644972778 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003130617 |
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| Protein GI | 257052784 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCC GTCTCAATCC TTTCGACGCA CTCGACGAAG TCCAAACCTC GTATCGGGAT
TACGTCGAGA CGTTCCAGAA CGTCGACGAC GATACGATTG AAGCCTGGAT CGACGAGCGG
ATCAACACTG GCAAGGTTCT CTGGAAGGAG CCGTTCGTCC AGCTGAACGA GCGATTCCAG
ACGGGTCGAT CCCTACACGA ATTCGTCGAT GAAGGATCGC TCCACTCCGG CGTCCTCGAT
GTCTTCGATG ACGAGAGCGG TGAACCGATC GAACCGTACA AGCACCAGTC AGAAGCGATC
GAATCGATTC GCGAGGGGAA CACGATCGTC TCAACTGGCA CGGGGTCGGG GAAGAGCTTC
GCGTTCGGCA TCCCGATCGT CAGCCACTGC CTCGAGGCTA TCGACCGAGG CGAGGAGGGG
ATCAAGGCCG TCATCGTCTA TCCGATGAAC GCCCTGGCGA ACTCGCAGTA CGAGGAGTTC
GCCGAACGAC TCGATGGGTC TGGTCTCAAG CTCGGTCTCT ACACGGGGGA CACACCCACG
GATCCCGACA GCGAGGCGGA GTTCCTCAAT CAATTCGGTC GTGACGAGCC GTACGACTGT
GAGGTCGTCT CCCGGGAGGA ACTCCGCGAG GATCCGCCGG ACATCCTGAT GACCAACTAC
GTGATGCTGG ACTACATTCT GACTCGTCAT CAGGATAAGG AACTCTTCCC GCCTGAGCAC
GACGGTGCCC TCGAGTTCCT TGTCCTCGAC GAGATCCACA CCTACACCGG CCATCAGGGG
GCCGACGTCG CGGCCCTCAT CCGGCGACTG CGTGAGCACA CTGGCGCGGG CGAAGGGCTG
ACCTGCATCG GGACCTCAGC GACCGTCCAG AGCGAGGAGG GCCTGGACGC CGACGAGGAG
ATTGCCGAGT TCTCCGAACG GATCTTCGGA TCGCCCGTCG ATCCGGACCG AGTCATTGGC
GAGTCTCACT ATACTCTCGA GCTGACCGGG GATGCGAATC TCCCCGAACG CGTCGAAGTA
ACTCAGGCGG ACATCCAGCG GTTCGATGGA TCTGCGGATG AGGCGACCAA ACTTGCAGAA
CGGATCACCG AGCGATCGCT CCGAAAGGAA GAAACGAAAT CCGCCAAAGC CATTGGAGAG
GTTCTCCTCG ATCACCCCAC CGTTGCCTTC CTCGACGAAC AGCTTAGCAC CCAGAGTCAA
CAGATCCAAC CGTCCGGGGA AGCCGCCGAA CAAGCGGAAG AATCGCTCGT TGAGGAATAC
CGCGAGAACT TCCGGCCTGC TGCGACAGCT GATGAAGCTC GTCGAGAACT CCAAGCTGCC
TTACTTGCGG GCACCGTCGG AACGACGGAG GTCCAAGGCG ACCAACAACC GATCTTCGTG
CCGAAACTCC ACTCGTTCTT TAGCCAGGGC TCTGGGTTGG TCGCGTGTCT CACCGAGGAA
ACGCTCGAGG ACGAAGAGCC CCATTTAAGC GACGCTGGAG ACCTTCAGTG TCGTCATTGT
GCTCGGGAAT ACGACCGGGA TATCAAGGCC TTCCCGCTGT CCTTCTGCCG CGCCTGTGGC
CAGGAATACT ACACTGTAGT CCGTGACGAC CATGGCCACC TGGCGCCACG TGAGGTGAGC
GATCTCAGTG TCGAAGACGA CGAGACAGCA GGATACGTCA TGCGAGGGGA GTGGGACCGG
GAAGAGACAC CGCTCCCGGC CGATTGGTTC GATGACGACG ATGTCCTCAG GGACACCTGG
GTCGATGCAG TTCCTGAACC AGCTACCTAC TGTCCCCAAC ATAATCGCCT GACTGACGGC
CACCTCGAGA GCGGACAGCT CGATTGTGGT TGTTTCGCCA CGCAAGGAAT TCAGGTAATG
TGGACGGAGG CGGAGTTCCT CTTCTGTGGC AACTGCGGGG TAAGTCACAC GCGAATGGGT
CGTGCGATGG AGCTCTCGAA GATGTTCAAG TTCGGGACAG TCGGTCGATC GACCGCGACT
GACGTCCTCA TCGGCTCGAC GATGCAGGAA TTGCCCGACC CTCAACAGAA GACGATCGCC
TTCAGCGACA ATCGACAGGA CACCGCATTG CAGGCTGCCC ACCTCAATAA TCTCTATCAG
CGGGTGAAGT TCCGCCGTGC GCTCTACGGT GCGTTGCAGG AAAACGGTCG TGTGAGCCTC
GCTGATATCG GAAACCGTAC CTTCGACGTC TTAGATAGCA ATGATGCACT ACCTGATGGC
CTCCAAACTA CCCGGTTCGG CGTTCCTGAC GACGAGAAGG GGAGATATAG CCGATATCTG
GAGTTCCATA CGCTGCTCGA ACTCAGGAAA AGCCAGCAAC GTGGTCAGCA GAGCCTCGAA
GACGTCGGTC TCATCGATGT TGAGTATGAG CACCTCGAGG ATCTCGCGGA AATCGACGAA
GCCTGGGAAG ACGTGCCGGA ATTAGCTGAC GCCGACCCGG CTGTCAGACA CGAATATTGT
AAGGCATTCC TCGACTTGTT CCGGCGAACT GCGGCGCTCA ATCACAACAT TTTCACCAAC
TTCGGTGATT TCCGGAGGGA CGTCATCAAC AATCTCGATG ACGATGCGCA GTTTCACAAG
CAGCAATTCT TCAGGTTCCC TGAAGGATTC AGTGACTCAG CAGACACAAG TGGCACTGAA
CAAATTCACC GGTTTACCCA CTGGCGATCT CGCCACGTCA AGTGGACGAC TAGGGCACTA
GATGTCGATT CGGATCGAGC TGTCGAGGTC ATTAAAGGAG TTCGAGATCT CCTAAGCAAT
CCCGATGAGC TTCCCCTTCT GGTGGAAGCG CCCATCTATC GCGGGCGCAA AGCCTACATG
CTCAACTCCG GGCTCGTTAA GTTGGTTCCG CACGATCCGA GTGATGTTTC GGTTTGTCCG
AAGTGTAAGA CCGTCGTTAC TCGAGATCGT CTCGAGATGT GCCTCAACAG TAGCTGTGGA
AACGTAACGC CCGAGCAGAC CGACCTCCGC GATTCGTACT TTCACGAGCT GTATACCCTC
TCCTTCGACG AAGCGGTGGA CATCTTCGCA GCCGAACACA GTGGCCAGAT CGAAGGAGAG
CTTCGGAAGG AATTAGAGAC CCAGTTCCGC GAGGACGGGA ACCTGAACAC GATTGTATGC
ACTCCGACTA TGGAGCTGGG GATCGATATC GGAGATCTTT CGAACGTCTT TATGCGTAAC
GTGCCGCCGA ATCCCAGCAA TTACGCCCAA CGCTCGGGTC GAGCAGGTCG TCAGGACCAA
CCGTCGCTTG TGACCACATT CTGTGGAAGT GGCTTCGGTC GTGCTTCGCA TGATCAGTAT
TTCTACCAAC GTCCGGAGCG GATCATCGCT GGTGAAATCT CACCACCGAC GTTTCTCCTC
AACAACCGAG ATCTCCTGAA AGCACATATC AACGCCCTCG TGCTCGAAGT CATCGACTTC
AAGCTACAGG GAAAGATCAA ACAGATCTTG GATATCAAAG CAACCGAAAA CAGTTACGAG
CTATATGGGA GTTATCGTGA CGACTTGGAA TCTGCGGTAG AATCGAACCG TGACGAAATC
ATCCAGGCCG TCAAACAAGC CTTCAGCAGA GAGCGTCAAC ACACGGAGTA CACTGACTGG
TTCACCGACG AATTTATCGA GGAACGTGTC GATGAGTTCG TTGGCAATTT TGACGAAGCC
TTCGATCCGT GGCGAATTGA ATACAGTCGG CTGACCAGAG AACTTCGTCG GTTGAACAAG
AAACTCGGTG CCGAAGGCGG GGAATACCTT GAACGGCAGG AGCGGGACGC GATCGAACGT
CGCCTGGAAA ACATGCGGGA TGGAGGGAAG CGATTCTACT CCTACCAGTA TCTTCGCTCA
CAGGGTTTCC TACCGAATTA TGGCTTCCCT CGATCGAACT GCACACTTGG ATTCACGACG
CTCGAAGACG ATATTCAGCG GGACGAGGCA CAGGCGATCC GCGAATTCGC TCCCGGAAAT
CACGTGTACT ACCGCGGGGA ACGACATGGC GTCAAGTACG CCAGGCCGAA GACTCGCGAT
GCCGAACCGG TTACGCGCCA TAAGATCGTT TGTCCTGCTT GTGAGACGAT TCTGATGGGT
GATGATGCAC AAGAGGCGGC TGGCTGCCCG GCCTGTGGAG AGACGTTCGA CGGAGTTCAC
ACGAACCCGA ACGCAATGGA ACTCCCGGAC CAGCGGGCCC GCCCGGAGGA AAACATCACC
AGTGATGACG AGGAGAGACA GAGGGAAGGC TATGACATCG AACAATACTA TGAACGCCGG
AATGCGACCG AGTACGAACT TGCGGGCGAT GGGGTTTCAG CCCATGTGAC TTATGAATCG
AATGCGCGGA TAGTCACGGT CAATTCCGGA ATCCGGGGCA GAGACGACGA CGAGCTTCAG
GGCTTTGCCC TGTGTACGGA GTGTAACCGA TGGCTCACGA GTTATAATCA GATCGAAGGC
CACGTTGACG ACGGCTGCTA TGCGAATGCA GACGAGGACG CAGTTCGCGA GGGTATCGAA
CTCTACACAG AGGGCGGACA TGATACCGTG ACCGTGACGA CGCCCTTACC CGGCCAGGTG
GATGAAAACC GGTCGGAATC CTTCTTCCAC ACACTTAAAG AAGCTCTTTA TCAGGGAATT
CTCGTCGAAT TCGATCTTGA TGAACAAGAG CTTTCGACCT TCATTAAGCC AGCGCCAGGC
GATCATGGCG ACCTTACTAT CGTAATTCAC GAGACAAGTG AAGGCGGTGC TGGTGCGCTA
CACGATCTAA CTGATCCAAC GAAGAATCGC TTTGCTCGGG CAATTCGAGA GGCACTTGAT
GTACTTCACG CCAATGATCC CGATGGATGC GAGCGGGCCT GTTACGAGTG CTTGATGTCC
TACTATAATC AGCGTGAACA TCCACTGTTC GATAGAGAGT TAGTCATGCC ATGGCTTCGA
GGAGCACAGT CGTTGACCCT GAATCCGATT GATCGCACTT ATGACGAGGA GAGATACCAG
GATCTCAGGA GTACTTGTGA ATCTAGCTTA GAACTCGATG TCCTCGAACG TGTCCGAGAC
GAAGGCTATC CCCTTCCTGA TGAGGCACAA AAGACGATAT ATGACGGGGA AGAACCAGTA
GTTGAAGCCG ACTTTTTCTA TGAGTCTGCA GGACGACCAC AACCCATTGC AGTATTCGTC
GATGGCCCGG ACCATCAGAA AGAACACGTC CGAGCAGGCG ACGAGGAAAA GCGCCAGAGG
TTGCTACAGA TGAATTATCG ATATTTTAGC GTCTCATCAC CAAGCGAAGT CCCCGATCTC
TGGGAGCAGA TATAG
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| Protein sequence | MATRLNPFDA LDEVQTSYRD YVETFQNVDD DTIEAWIDER INTGKVLWKE PFVQLNERFQ
TGRSLHEFVD EGSLHSGVLD VFDDESGEPI EPYKHQSEAI ESIREGNTIV STGTGSGKSF
AFGIPIVSHC LEAIDRGEEG IKAVIVYPMN ALANSQYEEF AERLDGSGLK LGLYTGDTPT
DPDSEAEFLN QFGRDEPYDC EVVSREELRE DPPDILMTNY VMLDYILTRH QDKELFPPEH
DGALEFLVLD EIHTYTGHQG ADVAALIRRL REHTGAGEGL TCIGTSATVQ SEEGLDADEE
IAEFSERIFG SPVDPDRVIG ESHYTLELTG DANLPERVEV TQADIQRFDG SADEATKLAE
RITERSLRKE ETKSAKAIGE VLLDHPTVAF LDEQLSTQSQ QIQPSGEAAE QAEESLVEEY
RENFRPAATA DEARRELQAA LLAGTVGTTE VQGDQQPIFV PKLHSFFSQG SGLVACLTEE
TLEDEEPHLS DAGDLQCRHC AREYDRDIKA FPLSFCRACG QEYYTVVRDD HGHLAPREVS
DLSVEDDETA GYVMRGEWDR EETPLPADWF DDDDVLRDTW VDAVPEPATY CPQHNRLTDG
HLESGQLDCG CFATQGIQVM WTEAEFLFCG NCGVSHTRMG RAMELSKMFK FGTVGRSTAT
DVLIGSTMQE LPDPQQKTIA FSDNRQDTAL QAAHLNNLYQ RVKFRRALYG ALQENGRVSL
ADIGNRTFDV LDSNDALPDG LQTTRFGVPD DEKGRYSRYL EFHTLLELRK SQQRGQQSLE
DVGLIDVEYE HLEDLAEIDE AWEDVPELAD ADPAVRHEYC KAFLDLFRRT AALNHNIFTN
FGDFRRDVIN NLDDDAQFHK QQFFRFPEGF SDSADTSGTE QIHRFTHWRS RHVKWTTRAL
DVDSDRAVEV IKGVRDLLSN PDELPLLVEA PIYRGRKAYM LNSGLVKLVP HDPSDVSVCP
KCKTVVTRDR LEMCLNSSCG NVTPEQTDLR DSYFHELYTL SFDEAVDIFA AEHSGQIEGE
LRKELETQFR EDGNLNTIVC TPTMELGIDI GDLSNVFMRN VPPNPSNYAQ RSGRAGRQDQ
PSLVTTFCGS GFGRASHDQY FYQRPERIIA GEISPPTFLL NNRDLLKAHI NALVLEVIDF
KLQGKIKQIL DIKATENSYE LYGSYRDDLE SAVESNRDEI IQAVKQAFSR ERQHTEYTDW
FTDEFIEERV DEFVGNFDEA FDPWRIEYSR LTRELRRLNK KLGAEGGEYL ERQERDAIER
RLENMRDGGK RFYSYQYLRS QGFLPNYGFP RSNCTLGFTT LEDDIQRDEA QAIREFAPGN
HVYYRGERHG VKYARPKTRD AEPVTRHKIV CPACETILMG DDAQEAAGCP ACGETFDGVH
TNPNAMELPD QRARPEENIT SDDEERQREG YDIEQYYERR NATEYELAGD GVSAHVTYES
NARIVTVNSG IRGRDDDELQ GFALCTECNR WLTSYNQIEG HVDDGCYANA DEDAVREGIE
LYTEGGHDTV TVTTPLPGQV DENRSESFFH TLKEALYQGI LVEFDLDEQE LSTFIKPAPG
DHGDLTIVIH ETSEGGAGAL HDLTDPTKNR FARAIREALD VLHANDPDGC ERACYECLMS
YYNQREHPLF DRELVMPWLR GAQSLTLNPI DRTYDEERYQ DLRSTCESSL ELDVLERVRD
EGYPLPDEAQ KTIYDGEEPV VEADFFYESA GRPQPIAVFV DGPDHQKEHV RAGDEEKRQR
LLQMNYRYFS VSSPSEVPDL WEQI
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