| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1709 |
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| Symbol | |
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| ID | 8383995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1708238 |
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| End bp | 1709992 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644972776 |
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| Product | SMC domain protein |
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| Protein accession | YP_003130615 |
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| Protein GI | 257052782 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4637] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000133048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTCA CCGAAATTGA CATCGAGAAT TTTCGTAGTA TTCCCGAAAC ATCTATTGGG
CTTGGAGACT TCAATTTATT GATTGGTAAA AATAACGCAG GGAAATCAAA TATCGTTAAG
GCAATCTATC GGTATCGGGA TTTAGTGGCT GGGAATGTGG ATATATCTGA TTTTTATGAA
TCAGCTGTAA CTCGGGGAAA GCAACCTGAG CCAATCAAGT TTAGCATATC ATATCAGATT
GAAGAGGGGA CTAGAGAGAA TCTAATTGAG AGTTTGTCGG AAAACCATGA GGTGTCTGCA
TCGGTCTATG ATACTCTCAT GGACAGTGAG TCATTTCAAA AGTACAATCA TGAAATATCG
ATTCGCGAAA CTGGCGTCTC ACACAATACA ATTAACACTT GTCTAAATGG TTCTAAAGTG
GAATTGGGGA CGCTTGATGT GTCTGACGAG TCTGTTGAAT TGCTCGACTT AGATGAATTG
ATGGACAAGA ACCGATCTCG ACACCAACTA TCTGACAAAC CATCAAACCA AATAAATGAT
GTTATTCCAT CTTCGATTCA GGGAGGTATT CTTGGAGAAT TTTCTGAGTG GAAGATAATC
GCACCATTCC GTAGAACCGA GGAGAGGGGA GTATTTGGGG CGGATCCTGA TTTAGATCCC
ACTGGCGAAA ATCTCACAAC CTTTCTGCAA TCGATTCGAG AAGACGGTAC TGGTAGATAT
AGTAAGATAT GCAAACAATA TGAAGATATA ATGGAGGGCG TAGATGAGGT TCGTATTGAA
ACACGCGAGG ACGGGGATGG TAATGCAGTG CCAACAATTC GGATTGATGA ACAGCAATCT
GATGATATCG GATTAGATGA GTTATCCTCT GGTGCCAAAG AGATTTTAAT ATTGGTTACA
CAAATAATCG TATCTCGATC CGATAACAGT CCCCTCTATA TTGAAGAACC GGAACTTCAT
CTCCATCCCG CTGCTGAACG AGAAATATAT TCTATGATCA CTCGAGTGGC ACAAGATTAC
AATACACAAG TCATCGTCAC CACCCATTCT GATGTCTTTG TAGATGAAGT AAACGTAGAG
GATATTTTCT CTGTCAAGCG CGGTGATTAC ACTTATATCG ATACCGTCAA CCAAGGTGAG
TTAGGCGAAA TTCTTACTGA CATTGGTTAT CCAACAAGCG AGTTTCTTCA AGCAGATCGT
ATCGTCTTTG TGGAAGGCCG AAGTGATCGT GTTGTACTTA GCAATTGGGC TAAGAAGCTC
GATTTGTCGT TTTCGATAAA TGGGGTTGAA CCTGTCAAGT TTGGAGGAGA TGAAATATTT
GAAGACGGGA ATCCATATAC TAACGAGATT CCAGATCTCT TGGGTCAAAT GGGAATACCT
TATAAGTACG TATTCGATTC GGATGGGGAA GATCCAGACA AGAAGGAATC AGAAATCGCG
AGTGAACTGG GCCTCTCGGC CGCAAAAATT TGTGTGATTG ACGGCTACTG TATCGAGTCA
TACTTGGCGA AACCGCCGAG AGCCTTGGCG GAGACGTTGG TTGTAGAACA GGAAGAGATA
GAAGAAGACC TACCGGATGA CCCCTATGGA GTAAATATGA AATCGAAGTT TGATTCCTTA
TTTAAAAAAC ACTTAGGGAC TGGGTATAGT GAGGAAAAGC ATGGGGCCGC AGTTGCTAAG
AAGATGCAGC CAAACGAAAT CTCTGAAGAG ATGAAAGCGA TGATCGAAGA TATCGTAACA
ATGGAGCGAA GATAA
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| Protein sequence | MQVTEIDIEN FRSIPETSIG LGDFNLLIGK NNAGKSNIVK AIYRYRDLVA GNVDISDFYE
SAVTRGKQPE PIKFSISYQI EEGTRENLIE SLSENHEVSA SVYDTLMDSE SFQKYNHEIS
IRETGVSHNT INTCLNGSKV ELGTLDVSDE SVELLDLDEL MDKNRSRHQL SDKPSNQIND
VIPSSIQGGI LGEFSEWKII APFRRTEERG VFGADPDLDP TGENLTTFLQ SIREDGTGRY
SKICKQYEDI MEGVDEVRIE TREDGDGNAV PTIRIDEQQS DDIGLDELSS GAKEILILVT
QIIVSRSDNS PLYIEEPELH LHPAAEREIY SMITRVAQDY NTQVIVTTHS DVFVDEVNVE
DIFSVKRGDY TYIDTVNQGE LGEILTDIGY PTSEFLQADR IVFVEGRSDR VVLSNWAKKL
DLSFSINGVE PVKFGGDEIF EDGNPYTNEI PDLLGQMGIP YKYVFDSDGE DPDKKESEIA
SELGLSAAKI CVIDGYCIES YLAKPPRALA ETLVVEQEEI EEDLPDDPYG VNMKSKFDSL
FKKHLGTGYS EEKHGAAVAK KMQPNEISEE MKAMIEDIVT MERR
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