Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1672 |
Symbol | |
ID | 8383952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 1657039 |
End bp | 1658535 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644972733 |
Product | MATE efflux family protein |
Protein accession | YP_003130578 |
Protein GI | 257052745 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTCGTC CAGAGTCCTC GATCGACAGC GCCGTCCAGT CGATCAAGCG TACCGGTTCC CGCGCAAACC CTGTCCGAGG CGTTATCCTT CTCATCGGCC TGGGGCTTGC CCGCCTCGGG TTGATCGACG CCGAGCGGGC ACGCAAAGCG ACGGATCTCT CCTGGCCGCG CGTGGTCACC GGGATCGCCC GGATGTCGAA AAACGCGGCC GACGTGGCGA TGGTCGGGGC GGCCTCGGGG ATCGCCACCA AGCCGGCGAT CTCGGGTGTC GGTCTGGCCG GCCCGTTCTG GGGGCTGGCG TTTGCTTTGG GCGGCGGCTT TGCCGCCGGG ACGATCGCCC TCGTCTCCCA GCGATTCGGG GCCGAGGAGT TCGGCCAGCT CGGCCAGGCC GTCCGTTCGA GTTTCGTCGT CGTCGTCGCG GTGACACTCC CCGTCGGCGC GGCCTTTTGG TTGTTCCCCG AGTGGCTCAT CAGCCTGCTC AACAGCGATC AACAGGTCAT CACCTACGGC GCAACCTACC TCCAGATCCT CGGCCTCGGC GTCCCGTTCG CGGGGCTCAA CCTCGTGGGC AGTCGCGTCC TCATCGGGGC CGACGACGCC CAGATCCCGA TGATACTCCG TGGCGGCGGT GCAGTACTCA ACATCGTCCT CAACGGCGTG TTCATCTTCG GGATGGGAAT GGGCGTGGCC GGTGCCGCCT GGGGGACCGT TGCGGCCAAC GTCCTCGTCA CGTCGCTGTT CATAGTCGGG CTTATCGCCG GCTGGCTCCC CGGTATCGGC CAGTTCCCGG TCTCGGTCTC ACCGCGTGGG ACGTATTTCC ATTGGGACGA TATCACCGAT GTGGTCTCCA TCGGCACGCC CGTCGTCGGG CGGAACATGA CCTGGACCGT CGCCCGCTTT CCCATGCTGT TCATCGTCGG GATGTTCGGG ACGACCGTCC TGACGGCGTA CACCGTCGCC CGGCGCATCT GGGGGCTGAT GAACGTTCCC GGATGGGGCT TTGGCCTCGC GGCGTCCAGT CTGGTCGGCC AGCATCTCGG CGAGGACGAC GAGGAGACAG CCGGGGTCTA CGGCCGGGAG ATCGTCCTCA TGGCGGTCGC GACCTACGGC GTCTCGGCGG CAGTCGTCGC CCTGGTTGCT CGGCCAGGTG TCGTCCTGCT CGGGGCCGAG GGCGAGGTCA TTCCGATCGC CGTCGGCATG GTCTTTGCCG GATGCCTCGC GATCATTCCC CAGGGCGTCA ACAGCACCAT CGCCGGGGCC TTGGACGCCA GCGGCGACAC GAACTGGCCG TTCATTTATC AGACGCTGGG CGTCTTCGCC GTCTCTATCC CCGCCGCGTA TCTCGGTGCG AAGACCTCGA TCGGCGTCTG GGGCATCTAC GTCGCCTTCC TCGGCGAGAC GCTCGTCCCC GCGGTGGGGA ACTACTATCG CTTCTCGACG GGCAAGTGGA AGGCCATCAG CCGGGAGTAC CGCCCTGAGA CGGCGCTAGA CGACTGA
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Protein sequence | MSRPESSIDS AVQSIKRTGS RANPVRGVIL LIGLGLARLG LIDAERARKA TDLSWPRVVT GIARMSKNAA DVAMVGAASG IATKPAISGV GLAGPFWGLA FALGGGFAAG TIALVSQRFG AEEFGQLGQA VRSSFVVVVA VTLPVGAAFW LFPEWLISLL NSDQQVITYG ATYLQILGLG VPFAGLNLVG SRVLIGADDA QIPMILRGGG AVLNIVLNGV FIFGMGMGVA GAAWGTVAAN VLVTSLFIVG LIAGWLPGIG QFPVSVSPRG TYFHWDDITD VVSIGTPVVG RNMTWTVARF PMLFIVGMFG TTVLTAYTVA RRIWGLMNVP GWGFGLAASS LVGQHLGEDD EETAGVYGRE IVLMAVATYG VSAAVVALVA RPGVVLLGAE GEVIPIAVGM VFAGCLAIIP QGVNSTIAGA LDASGDTNWP FIYQTLGVFA VSIPAAYLGA KTSIGVWGIY VAFLGETLVP AVGNYYRFST GKWKAISREY RPETALDD
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