| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1672 |
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| Symbol | |
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| ID | 8383952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1657039 |
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| End bp | 1658535 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644972733 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003130578 |
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| Protein GI | 257052745 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTCGTC CAGAGTCCTC GATCGACAGC GCCGTCCAGT CGATCAAGCG TACCGGTTCC
CGCGCAAACC CTGTCCGAGG CGTTATCCTT CTCATCGGCC TGGGGCTTGC CCGCCTCGGG
TTGATCGACG CCGAGCGGGC ACGCAAAGCG ACGGATCTCT CCTGGCCGCG CGTGGTCACC
GGGATCGCCC GGATGTCGAA AAACGCGGCC GACGTGGCGA TGGTCGGGGC GGCCTCGGGG
ATCGCCACCA AGCCGGCGAT CTCGGGTGTC GGTCTGGCCG GCCCGTTCTG GGGGCTGGCG
TTTGCTTTGG GCGGCGGCTT TGCCGCCGGG ACGATCGCCC TCGTCTCCCA GCGATTCGGG
GCCGAGGAGT TCGGCCAGCT CGGCCAGGCC GTCCGTTCGA GTTTCGTCGT CGTCGTCGCG
GTGACACTCC CCGTCGGCGC GGCCTTTTGG TTGTTCCCCG AGTGGCTCAT CAGCCTGCTC
AACAGCGATC AACAGGTCAT CACCTACGGC GCAACCTACC TCCAGATCCT CGGCCTCGGC
GTCCCGTTCG CGGGGCTCAA CCTCGTGGGC AGTCGCGTCC TCATCGGGGC CGACGACGCC
CAGATCCCGA TGATACTCCG TGGCGGCGGT GCAGTACTCA ACATCGTCCT CAACGGCGTG
TTCATCTTCG GGATGGGAAT GGGCGTGGCC GGTGCCGCCT GGGGGACCGT TGCGGCCAAC
GTCCTCGTCA CGTCGCTGTT CATAGTCGGG CTTATCGCCG GCTGGCTCCC CGGTATCGGC
CAGTTCCCGG TCTCGGTCTC ACCGCGTGGG ACGTATTTCC ATTGGGACGA TATCACCGAT
GTGGTCTCCA TCGGCACGCC CGTCGTCGGG CGGAACATGA CCTGGACCGT CGCCCGCTTT
CCCATGCTGT TCATCGTCGG GATGTTCGGG ACGACCGTCC TGACGGCGTA CACCGTCGCC
CGGCGCATCT GGGGGCTGAT GAACGTTCCC GGATGGGGCT TTGGCCTCGC GGCGTCCAGT
CTGGTCGGCC AGCATCTCGG CGAGGACGAC GAGGAGACAG CCGGGGTCTA CGGCCGGGAG
ATCGTCCTCA TGGCGGTCGC GACCTACGGC GTCTCGGCGG CAGTCGTCGC CCTGGTTGCT
CGGCCAGGTG TCGTCCTGCT CGGGGCCGAG GGCGAGGTCA TTCCGATCGC CGTCGGCATG
GTCTTTGCCG GATGCCTCGC GATCATTCCC CAGGGCGTCA ACAGCACCAT CGCCGGGGCC
TTGGACGCCA GCGGCGACAC GAACTGGCCG TTCATTTATC AGACGCTGGG CGTCTTCGCC
GTCTCTATCC CCGCCGCGTA TCTCGGTGCG AAGACCTCGA TCGGCGTCTG GGGCATCTAC
GTCGCCTTCC TCGGCGAGAC GCTCGTCCCC GCGGTGGGGA ACTACTATCG CTTCTCGACG
GGCAAGTGGA AGGCCATCAG CCGGGAGTAC CGCCCTGAGA CGGCGCTAGA CGACTGA
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| Protein sequence | MSRPESSIDS AVQSIKRTGS RANPVRGVIL LIGLGLARLG LIDAERARKA TDLSWPRVVT
GIARMSKNAA DVAMVGAASG IATKPAISGV GLAGPFWGLA FALGGGFAAG TIALVSQRFG
AEEFGQLGQA VRSSFVVVVA VTLPVGAAFW LFPEWLISLL NSDQQVITYG ATYLQILGLG
VPFAGLNLVG SRVLIGADDA QIPMILRGGG AVLNIVLNGV FIFGMGMGVA GAAWGTVAAN
VLVTSLFIVG LIAGWLPGIG QFPVSVSPRG TYFHWDDITD VVSIGTPVVG RNMTWTVARF
PMLFIVGMFG TTVLTAYTVA RRIWGLMNVP GWGFGLAASS LVGQHLGEDD EETAGVYGRE
IVLMAVATYG VSAAVVALVA RPGVVLLGAE GEVIPIAVGM VFAGCLAIIP QGVNSTIAGA
LDASGDTNWP FIYQTLGVFA VSIPAAYLGA KTSIGVWGIY VAFLGETLVP AVGNYYRFST
GKWKAISREY RPETALDD
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