| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1669 |
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| Symbol | |
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| ID | 8383949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1651933 |
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| End bp | 1652979 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644972730 |
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| Product | tRNA splicing endonuclease |
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| Protein accession | YP_003130575 |
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| Protein GI | 257052742 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.468654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGG TCCTGGAGGG AGACGTGGTT CGCGGCGGCA GCGAGGCTCG CGAGCGCTTC
TACGATTCGC GGGGCTACGG CCACGTCGAC GGCGGCGGGC TGGCGCTTTC GCCTGTCGAA
GCAGCCCATC TTCTCTACCG GGGCGATGTC GAGCACATCC GGGACGGGAG AAGCGACGAG
GCTCTGGATT TCCAGGCACT GCTCTCCTCG GCTGCTGTCT CGGAGATCGA CGTTCTCGTC
TACAAGGACC TTCGGGACCG GGGATTCTAC CTCTCGCCCG CCCGCGAGGG CTGGGTCGAC
GGTCCGTCCG GGACCGACTT CGTGGTTTAC CCCCGCGGAC AGGGCCCCTG GGACGACGAT
GTCGCCTATC GGATCCGGGC GATAAGTGAG CGGACGGCCG TCTCCGCGGC CACGCTGGGC
GATAGCGTCC TGGCAGTCGT CGACGAGGAG TCGGCGATCA CCTACCTCGA GACCAGTCAC
CCCGACATCG CGGGCTCGTC GACCACGGAT CTGCCGAGCG GTGTCGCGGC CGACCTGCTG
GGCGATCGCG TCCTGGCCCC GGACCCGCCC GAAGCACTCT ATTTCGAGGG GTTCTACGGC
CAACCGCTCG ACGACGAGGC GGGCGAGCCC CTCCAGCTCT CGCTGATCGA GGCCGCCGCG
CTGGCCAGCC AAGGCGTGCT CGACGTCGAG GGTGGCGCGG ACGCGATCGT CGAGTGCGGT
CGCGAGGTCG AAGGCGAGCG CTTCGACCGG CGGCTGGCGG TGTATCGTGC CCTCCGCGAG
CGTGGGGTCG TCCCCAAGAC GGGCTACAAA TTCGGCGCGG ACTTTCGGAC GTACGCCGAC
GTCGAAAGTG TCGACTCGCT GGGCCACTCC GAGTTGCTCG TGCGGGTGTT ACCGGCGGAT
CACGCTTTCA CGCCGCGCGA TCTCGCGCTT GACGTCCGAC TGGCCCACGG CGTTCGCAAG
CGGATGGTGT TCGCGCTGGT GGCGGAGGCT GACGCGGACG GCGACCCCCG AATCGAGTGG
CTCGAAGTCG GGCGACTGAC GCCGTGA
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| Protein sequence | MELVLEGDVV RGGSEARERF YDSRGYGHVD GGGLALSPVE AAHLLYRGDV EHIRDGRSDE
ALDFQALLSS AAVSEIDVLV YKDLRDRGFY LSPAREGWVD GPSGTDFVVY PRGQGPWDDD
VAYRIRAISE RTAVSAATLG DSVLAVVDEE SAITYLETSH PDIAGSSTTD LPSGVAADLL
GDRVLAPDPP EALYFEGFYG QPLDDEAGEP LQLSLIEAAA LASQGVLDVE GGADAIVECG
REVEGERFDR RLAVYRALRE RGVVPKTGYK FGADFRTYAD VESVDSLGHS ELLVRVLPAD
HAFTPRDLAL DVRLAHGVRK RMVFALVAEA DADGDPRIEW LEVGRLTP
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