Gene Huta_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1666 
Symbol 
ID8383946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp1649765 
End bp1650442 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content62% 
IMG OID644972727 
Producttranscriptional regulator, TrmB 
Protein accessionYP_003130572 
Protein GI257052739 
COG category[K] Transcription 
COG ID[COG1378] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.481798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGACA CCAGCCGAAG TTTGAAGTTC ACGGATTTCG TAATACAGGT GATGACGCCG 
AGTCCAGCCA CGGAAACACC ATCGCAGGAT TATGCAGCCG GGGTCGATCA GCTCGCGACC 
GTCGGTCGCC TACTGGACCG GCCGGAACTC GCACGCGTGT ACGTCTACGT CTGCTATTAC 
GGGCCAGTCA CCCGACCGGA GATCGTCGAG ACCCTCGACG TCCCGAAGAC GACTGTCTAC 
GACCACGTCG GGACGTTGGA GGCGCTGGGT GCTGTTGCAC TCGTCGGTGA TCGTCCCGTT 
GCGGTGTCGG CGGCCCCCGT CTTGATCGAC GCCGACGGGA TCACCGTCAC GCCGACGCTT 
CTCCATGCCG TCGCCATGCA AGTGATCGAC AAGGACATCG CCCATTTCAC AGAGCGCCAC 
GGGGTCGGCA AACTGGCCGC CGCTGTCCGG CAGGCCGGGC TGCATTACGC GGGGCGGATC 
ACCCAGCGGA TGGTAGCCGA GCCTCTCGGC ATTTCAACCG GCGAGGCGAT CCAAATCGTG 
CTCGCGCTTG AACCCGTCCT CGCAGCGGGA AAACAGCACG ATCCGCACTT CAAGAACCTC 
TTTCCGGATG TCGCCGACGA TATCGCATTC GACGCCGATA TTGACGTGAC TGCCCCACTC 
TCGGATACAG AGTCATAG
 
Protein sequence
MHDTSRSLKF TDFVIQVMTP SPATETPSQD YAAGVDQLAT VGRLLDRPEL ARVYVYVCYY 
GPVTRPEIVE TLDVPKTTVY DHVGTLEALG AVALVGDRPV AVSAAPVLID ADGITVTPTL 
LHAVAMQVID KDIAHFTERH GVGKLAAAVR QAGLHYAGRI TQRMVAEPLG ISTGEAIQIV 
LALEPVLAAG KQHDPHFKNL FPDVADDIAF DADIDVTAPL SDTES