Gene Huta_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1627 
Symbol 
ID8383906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1608066 
End bp1608824 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID644972688 
ProductABC transporter related 
Protein accessionYP_003130534 
Protein GI257052701 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.868529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGAG ACACGAGCGC GATCACTGCC CGAGAGATAA CCAAACGCTA CGGGAACACA 
GTCGCGGTCG ATGGCCTGAA CCTGGACGTT CCGACGGGCG TCGTCTACGG GTTTCTTGGC
CCCAACGGCG CGGGCAAGAC CACCACGATG CGGATCCTGA CAGGGTTGAT AGAACCGACC
AGCGGCGACG GGTTCGTCGA TGGAATCGAC TGTTCAGATC GGGGAGACCT CGTCGATCAC
ATCGGACTCC TTCCGGAAGA GCCACCGCTG TACCGGGAGT TGACCGGCCG CGAGCAGTTG
CACTTCGCCG CTGATCTGCG GGGGGTTCCC TGGGAACGAG TCGAGGATCG GGCGCTGGAT
ATCGCCGACT CACTGGACCT CCAGGCGGAT CTCGACCGGC GGATCGACGG CTATTCCAAA
GGGATGAAAC AGAAGACAGC GTTCATCCAG GCCGTCCAGC ACGATCCCGG GGTCGTCTTT
CTCGACGAGC CGACGTCGGG GCTGGATCCA CGGGCAGCCA AGACGCTCCG GGAGTTGATC
GTGGAGTTGG CCAGCGGCGA CACGACGGTG TTCCTCTCGA CGCACATCCT GCCCGTCGTC
GAGGAGATCG CCGACCGCGT CGGCGTTCTC TACGACGGGC GACTCGTCTC GGAGGGGTCG
CCAGGTGGGC TCGCGGCGGC CGCCGACGAG GACGGGGAGG CGGACCTCGA AGATGCGTTC
CTCGAACTGA CTGCCGAACC CGAACGAGCC TGGCAATGA
 
Protein sequence
MTGDTSAITA REITKRYGNT VAVDGLNLDV PTGVVYGFLG PNGAGKTTTM RILTGLIEPT 
SGDGFVDGID CSDRGDLVDH IGLLPEEPPL YRELTGREQL HFAADLRGVP WERVEDRALD
IADSLDLQAD LDRRIDGYSK GMKQKTAFIQ AVQHDPGVVF LDEPTSGLDP RAAKTLRELI
VELASGDTTV FLSTHILPVV EEIADRVGVL YDGRLVSEGS PGGLAAAADE DGEADLEDAF
LELTAEPERA WQ