Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1627 |
Symbol | |
ID | 8383906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 1608066 |
End bp | 1608824 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644972688 |
Product | ABC transporter related |
Protein accession | YP_003130534 |
Protein GI | 257052701 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.868529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGAG ACACGAGCGC GATCACTGCC CGAGAGATAA CCAAACGCTA CGGGAACACA GTCGCGGTCG ATGGCCTGAA CCTGGACGTT CCGACGGGCG TCGTCTACGG GTTTCTTGGC CCCAACGGCG CGGGCAAGAC CACCACGATG CGGATCCTGA CAGGGTTGAT AGAACCGACC AGCGGCGACG GGTTCGTCGA TGGAATCGAC TGTTCAGATC GGGGAGACCT CGTCGATCAC ATCGGACTCC TTCCGGAAGA GCCACCGCTG TACCGGGAGT TGACCGGCCG CGAGCAGTTG CACTTCGCCG CTGATCTGCG GGGGGTTCCC TGGGAACGAG TCGAGGATCG GGCGCTGGAT ATCGCCGACT CACTGGACCT CCAGGCGGAT CTCGACCGGC GGATCGACGG CTATTCCAAA GGGATGAAAC AGAAGACAGC GTTCATCCAG GCCGTCCAGC ACGATCCCGG GGTCGTCTTT CTCGACGAGC CGACGTCGGG GCTGGATCCA CGGGCAGCCA AGACGCTCCG GGAGTTGATC GTGGAGTTGG CCAGCGGCGA CACGACGGTG TTCCTCTCGA CGCACATCCT GCCCGTCGTC GAGGAGATCG CCGACCGCGT CGGCGTTCTC TACGACGGGC GACTCGTCTC GGAGGGGTCG CCAGGTGGGC TCGCGGCGGC CGCCGACGAG GACGGGGAGG CGGACCTCGA AGATGCGTTC CTCGAACTGA CTGCCGAACC CGAACGAGCC TGGCAATGA
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Protein sequence | MTGDTSAITA REITKRYGNT VAVDGLNLDV PTGVVYGFLG PNGAGKTTTM RILTGLIEPT SGDGFVDGID CSDRGDLVDH IGLLPEEPPL YRELTGREQL HFAADLRGVP WERVEDRALD IADSLDLQAD LDRRIDGYSK GMKQKTAFIQ AVQHDPGVVF LDEPTSGLDP RAAKTLRELI VELASGDTTV FLSTHILPVV EEIADRVGVL YDGRLVSEGS PGGLAAAADE DGEADLEDAF LELTAEPERA WQ
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