| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1619 |
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| Symbol | |
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| ID | 8383898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1598883 |
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| End bp | 1602464 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644972680 |
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| Product | DNA polymerase II large subunit |
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| Protein accession | YP_003130526 |
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| Protein GI | 257052693 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1933] Archaeal DNA polymerase II, large subunit |
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| TIGRFAM ID | [TIGR00354] DNA polymerase, archaeal type II, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.710974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGACG CCGACGAGCG GTACTTCGCG CGGCTGGAAG ACGAACTCGA TACGGCCATG
GACGTGGCCC GGAGCGCTCG CGAGCGGGGC GGCGATCCGA CGACCGACGT CGAGATACCC
GTCGCGAAGG ACATGGCCGA TCGCGTCGAG AACATCCTCG GGATCGACGG GGTCGCCGAA
CGGGTCCGGG ATCTCGAAGG CGAGATGTCA CGCGAGGAGG CCGCCCTCGC CCTGGTCGAG
GACTTCGTGG CGGGGACCGT CGGTGACTAC GATACGAAGG CGGGCAAGAT CGAGGGGGCC
GTCCGGACGG CCGTCGCCCT GCTCACCGAG GGGGTCGTCG CCGCGCCGAT CGAGGGGATC
GACCGCGTCG AGATCCTCGA CAACGACGAC GGCACCCAGT TCGTCAACGT CTACTACGCC
GGGCCGATCC GATCCGCCGG CGGGACCGCC CAGGCGCTCT CGGTCCTCGT GGCCGACTAC
GCCCGGACCC TGCTCGACAT CGACGAGTAC CACGCTCGCG ACGAGGAGAT CGGCCGTTAC
GTCGAGGAGA TCGAACTCTA CGACGAGGAC ACCGGCCTGC AGTACTCGCC GAAGGAAAAG
GAAACTCGAC ACATCACCGA TCACATGCCG ATCATGCTCG ACGGTGAGGC CACCGGTGGC
GAGGAGGTCT CGGGTTATCG GGACCTCGAA CGCGTCGACT CCAACAGCGC CCGGGGCGGG
ATGTGTCTGG TCCTCGCAGA GGGAATCGCG CTCAAAGCCC CCAAGATCCA GCGCTACACC
CGTCAGCTCG ATGACGTCGA GTGGCCGTGG CTCCAGGACC TGATCGACGG CACGATCGGG
GCGGACGAGA GCGAGGACGA GACGGGCGGA GAAGAAGACG AAGACGGTTC GGCCGACGGC
GAGAGGGACA CGCAGGACGA CGACGCGTCC ACAGTGGACG GCCCACCCCG GGCAGAGCCA
TCGAAGAAGT ACCTCCGGGA TCTCATCGCG GGTCGCCCTG TCTTCTCCCA TCCGAGCGAA
TCGGGTGGAT TTCGACTGCG CTACGGCCGC GCCAGAAACC ACGGCAACGC CACGGCGGGC
GTCCACCCGG CGACGATGCA CCTCGTCGAC GACTTCCTCG CGACGGGGAC CCAGATCAAG
ACCGAGCGCC CGGGGAAGGC TGCGGGTGTG GTCCCGGTCG ACACCATCGA GGGACCGACG
GTCCGGCTCG CTAACGGCGA CGTCCGGCGG ATCGACGACC CCGAAGAGGC CAAGGAAGTC
CGCAACGGCG TCGAGTCGGT CCTGGATCTC GGGGAGTATC TCGTCAACTA CGGCGAGTTC
ATCGAGAACA ATCATCCGCT CGCGCCGGCT TCCTACACTG TCGAGTGGTG GGTCCAGGAG
TTCGAGGCGG CCGGCGCGGA CGTCCAGGCG ATGACTGATT CCGTCGAGAT CGACCTCGAC
GATCCCACGC CGTCCCGAGC CCTCCAGTGG GCCCGGGAAT ACGACGCCCC GCTCCACCCG
AAATACACCT ACGTCTATCA CGACGTGAGC GTCGAGGCGA TCGACGCCCT GGCCGACGCG
ATCGCGGACG GCGAGATCGT CACGGGGGAC GGGGCCACGG CGGAGCCCGG TGATCACGCC
GACAGGGCGG GCACCGCGAC CGGCGATCTC GTCCTCCCGC GGAGTGAGAT CGCCCGACGG
ACCCTCGAAT CGCTGCTGGT CGAACATACC CAGACTGACG CCTCGCTGAT TGTCCCGACC
TGGCGGCCGC TCGTCGAGAC GCTGGGATTC AACGACGACC TGACGCGACC GTGGACGCTG
TCGGACCTTT CGGAAGCGGC CCGCACGTAC GACGATGGGG AGAACGCCAT CGAGGCCGTC
AACGAGATCG CCCCCTTCGA CGTCCGTGAG CGAGCCCCGA CCCGGATCGG CAACCGGATG
GGCCGCCCCG AGAAGTCCGA GGAACGGGAA CTCTCGCCGG CCGTCCACAC GCTGTTCCCG
ATCGGCGAGG CCGGGGGCAA TCAGCGTGAT GTCGCGAAGG CGGCCGGGCA CGCCGACGAG
ATGGGTGACG CACCGGGCGA AGTCGAACTC GAGGTCGGCC GTCGGCGGTG TACCGATTGC
GCCACCGAGA CCTATCAGGC GCGGTGCCCC GACTGTAACG GCATCACCGA AACCATCTAC
GTCTGCCCGG ACTGCGACCG CGAGGTCGAC CCCGACGAGT CCGGCCGGGC CGAGTGTCCA
CGGTGTGAGA CCATCGCCTC ACCGACCAGA ATGACGACGA TCGACGTCGG CGAGGTCTAC
CAGCAGGCTA TGGACAGCGT CGGCGAGCGC GAGGTTGCCT TCGACGTACT CAAAGGCGTC
AAAGGATTGA CCTCGAAGGA AAAAATGCCC GAACCGATGG AGAAGGGTGT CCTCCGGGCC
AAACACGACA TCAGCGCGTT CAAGGACGGG ACGGTCCGCT ACGACATGAC TGACCTCCCC
GTCACCTCAG TTCGGCCGGC CGAGCTCGAC GTCACCGTCG AGCAGTTCCG CGAGCTGGGC
TACGAGGCAG ACATCCAGGG CGATCCACTG ATCCACGACG ATCAACTGGT CGAGTTGAAC
GTCCAGGACG TCGTCCTCTC GGACGGCGCG GCCGAGCACA TGCTCAAGAC GGCGGCCTTC
ATCGACGACC TCCTCGAGTC GTACTACGGT CTCGATCCCT ACTACGAACT CGAGGATCGA
GACGACCTCG TCGGCGAACT CGTCTTCGGG ATGGCTCCCC ACACCAGCGC GGCGACCGTC
GGCCGCGTCG TCGGCTTCAC CTCGGCTGCG GTGGGGTACG CTCACCCGTA CTTCCACGCG
GCGAAACGAC GGAATTGTGA CGGAGATGAA GATTGTGTAA TGCTTCTCCT TGATGGACTT
TTGAACTTTA GTGTCAAGTA CCTGCCAAAT CAGCGAGGGG GCCGCATGGA CGCGCCCTTA
GTGATGTCTT CACGGATCGA CCCGGCCGAG ATCGACGACG AGGCCCACAA CATCGACATC
GTCGAACAGT ATCCCCTGGA ACTCTACGAA GCGACCCGCG AGATGGCCCA TCCCGAGGAC
GTTGACGTCA AGATCGCCGA GGACACCCTC GGGACGGACG AGGAGTACAC TGGCTTCGCC
CACACCCACG ACACCAGCAA CATCGCCCTC GGGCCGGATC TCTCGGCGTA CAAGACCCTC
GGATCGATGG AGGACAAGAT GGACGCCCAA CTTGAAATCT CCCGGAAACT CCGGGCCGTC
GACGAGACCG ACGTCGCCGA GCGAATCATC GAGTATCACT TCCTGCCGGA CCTGATCGGC
AACCTTCGTG CCTTCTCGCG GCAGGATGTC CGGTGTCTGG GCTGTGGCGA AAAGTACCGC
CGGATGCCCC TCACCGGCAC CTGTCGGGAG TGTGGCGGTG ACGTGAACCT GACCGTCCAC
GAGGGCTCGG TCAACAAGTA CATCGACACG GCCACGCGCG TGGCCGAGGA GTTCGGGGCC
CGGGAGTACA CTAAACAGCG CTTAGAGATC CTGGATCGCG CGATCAAGCG CGTCTTCGAG
GACGATACGA GCAGGCAGAC GGGGATCGGG GACTTCATGT GA
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| Protein sequence | MRDADERYFA RLEDELDTAM DVARSARERG GDPTTDVEIP VAKDMADRVE NILGIDGVAE
RVRDLEGEMS REEAALALVE DFVAGTVGDY DTKAGKIEGA VRTAVALLTE GVVAAPIEGI
DRVEILDNDD GTQFVNVYYA GPIRSAGGTA QALSVLVADY ARTLLDIDEY HARDEEIGRY
VEEIELYDED TGLQYSPKEK ETRHITDHMP IMLDGEATGG EEVSGYRDLE RVDSNSARGG
MCLVLAEGIA LKAPKIQRYT RQLDDVEWPW LQDLIDGTIG ADESEDETGG EEDEDGSADG
ERDTQDDDAS TVDGPPRAEP SKKYLRDLIA GRPVFSHPSE SGGFRLRYGR ARNHGNATAG
VHPATMHLVD DFLATGTQIK TERPGKAAGV VPVDTIEGPT VRLANGDVRR IDDPEEAKEV
RNGVESVLDL GEYLVNYGEF IENNHPLAPA SYTVEWWVQE FEAAGADVQA MTDSVEIDLD
DPTPSRALQW AREYDAPLHP KYTYVYHDVS VEAIDALADA IADGEIVTGD GATAEPGDHA
DRAGTATGDL VLPRSEIARR TLESLLVEHT QTDASLIVPT WRPLVETLGF NDDLTRPWTL
SDLSEAARTY DDGENAIEAV NEIAPFDVRE RAPTRIGNRM GRPEKSEERE LSPAVHTLFP
IGEAGGNQRD VAKAAGHADE MGDAPGEVEL EVGRRRCTDC ATETYQARCP DCNGITETIY
VCPDCDREVD PDESGRAECP RCETIASPTR MTTIDVGEVY QQAMDSVGER EVAFDVLKGV
KGLTSKEKMP EPMEKGVLRA KHDISAFKDG TVRYDMTDLP VTSVRPAELD VTVEQFRELG
YEADIQGDPL IHDDQLVELN VQDVVLSDGA AEHMLKTAAF IDDLLESYYG LDPYYELEDR
DDLVGELVFG MAPHTSAATV GRVVGFTSAA VGYAHPYFHA AKRRNCDGDE DCVMLLLDGL
LNFSVKYLPN QRGGRMDAPL VMSSRIDPAE IDDEAHNIDI VEQYPLELYE ATREMAHPED
VDVKIAEDTL GTDEEYTGFA HTHDTSNIAL GPDLSAYKTL GSMEDKMDAQ LEISRKLRAV
DETDVAERII EYHFLPDLIG NLRAFSRQDV RCLGCGEKYR RMPLTGTCRE CGGDVNLTVH
EGSVNKYIDT ATRVAEEFGA REYTKQRLEI LDRAIKRVFE DDTSRQTGIG DFM
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