Gene Huta_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1612 
Symbol 
ID8383891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1592404 
End bp1593516 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content63% 
IMG OID644972673 
ProductSignal peptidase I-like protein 
Protein accessionYP_003130519 
Protein GI257052686 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACC CGAGCGACGA TCGCGACCCG CCAGATCGGG AGCGCGATCG GCGAGAACCT 
GCCCCGGACA CGCCCTCCGA ACCCGGGGAC GATGACGACG ACAGCGCAGG TAACGGAGGG
GTAGCTGATC GTGACGAGCA GTCGGCTCAG GACCAGCCGT CAGCTGGTCG TCGTGAACGC
GACTCGACGC ACTCTCCACC GGAAGACCGG ACGGCCGGAA CTCGATCACC GCTCGAAGAG
ACGGAGCCCA GTAACCAGCC TCCATCAGGG GACAGAGACC ATCGTGGGGC CGATTCGGAT
CAGACCGGTG CAGCGACGGG CCGGGATGTC GCCGAACGGC ACCCGCCATC GATCGATAGA
GAGAGACGGA AACCGCCACA GAGACGGGGG TCCGCAAGCG GCAGTGACAG TTGGCTCACC
CGCGTGTTCC AGTATACGTT CGACATCGCA AGCAGCGTGT TGATCGTCGT TCTGATCGGC
GCGCTCCTGT TCGCGACGAG CGGGGTCTGG CCACCGCTGG TGGCGATCGA AAGTCCCAGC
ATGGAACCCA ACATCGATAC CGGAGATCTC GTCTTCGTAA TGGAGGAACA CCGGTTCTCC
GGGCCAGGAG CCACGGAGGA ATCCGGGATC GTGCCGGCAC GTGCAGGCCA GGAGACGAAT
TATCGCATGT TCAACGGCTA CGGTGACGTA ATCATCTACC AACCAGACGG CAACGGCGAG
GCGACACCGA TCATTCACCG GGCAATGTTC TGGGTTGCGG CGGAGGAGAA CTGGTACGAC
CGTGGGGATC CAGCGGCGAT CGGGAACGCG GACAATTGCG AAGAGCTCGC CAACTGCCCG
GCTCCCCACG CCGGGTTCAT CACCAAGGGC GACAACAATC GCTACTACGA CCAGGTCGGT
AATCAGTTCA GCGGGCCGGT CAAGCCCGAG TGGATAATCG GCACCGCCGA GTATAACGTG
CCGGGACTCG GCCGGGTCCG ACTCCTGACC GGAGAGGCAC AGTCGCGGTA CGGAACGGTG
GCGAAAGATG CGGAGCACGT AACAGCTGGG ACGACTGTGA CGGCAGCAAC GAACGGAACC
GAAAGCGTCG ATTTCCCGTC GATCGCGCCG TGA
 
Protein sequence
MSDPSDDRDP PDRERDRREP APDTPSEPGD DDDDSAGNGG VADRDEQSAQ DQPSAGRRER 
DSTHSPPEDR TAGTRSPLEE TEPSNQPPSG DRDHRGADSD QTGAATGRDV AERHPPSIDR
ERRKPPQRRG SASGSDSWLT RVFQYTFDIA SSVLIVVLIG ALLFATSGVW PPLVAIESPS
MEPNIDTGDL VFVMEEHRFS GPGATEESGI VPARAGQETN YRMFNGYGDV IIYQPDGNGE
ATPIIHRAMF WVAAEENWYD RGDPAAIGNA DNCEELANCP APHAGFITKG DNNRYYDQVG
NQFSGPVKPE WIIGTAEYNV PGLGRVRLLT GEAQSRYGTV AKDAEHVTAG TTVTAATNGT
ESVDFPSIAP