Gene Huta_1591 details

Gene Information

• Locus tag: Huta_1591
• ID: 8383870
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1564863
• End bp: 1566863
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644972653
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_003130499
• Protein GI: 257052666
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTTTACT GGACACTCTA TCTCGCGGCC CTGCTCGGTG CGAGCGGGTT CGCCGTCGCC 
ATCGTCGCCT GGCTGTGGCG ACGGGAACGC GATCTCTCGA CGAATCTGTT TCTCGTGATC 
GCCGCTGTCC AGGCTGTCAG TGGTGTGCTG GTCACCGCGG AGTTGATGAC AGCCAGTCGG 
TCACTCTCTA TCGTGGTCTT CGGGTTGCAG AATGCCGTGC TGGCCGGAGT GACGCCCGCC 
TTTTTCCTGT TCGTGCTGGC GTCGCTGGGA TACCGGCGTC ACTTGACGCG GCCAGTGATC 
GGCCTCGTGT TCGGGATCTT CGCCGTGTCG GGGCTCATCC AGCTGACCGA CCCAGTCCAC 
GGACTGTACT GGGCTGAATA CACGGTCACC GACTCGACAT TCCACTACGT CGCCGGCGAA 
CCGACCAATC TGTCGTTTCT GCTCGTCCTC CCACAGATGT TGTTTTACTA TGTGGCCATG 
GGATTGCTCG GCGCGAACGT CCTGTTCGGG TCCGGGAAGC GACGACGACA ATCGGCAGCC 
CTGTTCGTCG GGTTCCTCCC GGCGTTCGTC ATCACGACGA TTTGGTCGAT GGGCGTCCTT 
CTCGGCCCGA TCAACGGCGC GCTCGTGATC GGCGGCACGT GGTCGCTCGC AGTCATTGCG 
TGGGCCGTCT TTCGTCAGCA GCTGTTCGAC GTCGTCCCGA TGGCCAGAGA AACCGTCTTC 
GAGGCCCTCG AAGAGGTAGT CATCGTCGTC GACAGACGAC AACGGATCCT GGATTACAAC 
GCTGGCGCGG CCGAGACGTT CCCCGAGCTC GCGACCGCGG ACGGGGGAGC TCTGGGCGCA 
GTCGTGCCGA GTATCGTCGA TGCGAACGGT TCGGACACCG GCGGGACGAA CAGCGAACAG 
GGACAGAAAG CAACCTCGGT GGACGAGAAC GGCGTGGGTG ACGCCGACCA CCCGTTTGTC 
GATTCGTTCA CGCGCCACGT CGACGGCGAA CCGCGGGAGT ACGAGGTGAG TGTGACGCCG 
ATCTCGGTCA GCGACACGAC GGGCGGATAC GCCGTCGTCG TCAGGGACGT CACCGAGCGC 
CGAAAGCGGG TGCGCCACCT CAGACAGCAG ACGGCACAGC TCGAACGCTT CGCCGAAACC 
CTCTCACACG ATCTTCGCAA CCCCCTGAGC GTCGCCCGGG GACGGATCGA CCTCGCCCAG 
GAGACCGGCG AGGAGGCACA TCTCGAGACG GCCGCCGAGG CGCTCGAACG GATCGAACAA 
CTCATCGAGG ACACGCTGAC GCTCGCCCGC GAGGGCCAGG CGATCGAAGA CCGCGAGCCG 
GTCGAACTCG GCGAACTGGC TCGCAACGCC TGGGCGACGA CCGACACCGG CGAGGCATCC 
TTCGAGGTCA TGCCCGACGC CGAGATGACG GTCTACGCCG ACCACTCGCG GCTGCGAACC 
GTCTTCGAGA ACCTCTTCCG GAATGCTGTC GAACACAGCT CCACGAATCC TGACTCGCAA 
ACCCGTCAAG ACGGCGTCGA ACACAGCTCC ACGAACGGGG ATTCGAACGC GCCACAGGAG 
CCCGCCGAAC GCCGACCGAT GGCGGATGAG CAGCCCGAAC AGCCAGCTGA TCGCGGCAGT 
ATCGAGGCGA CGCCGGACAC CGCCACGCCG CTGATGCGGG GAAACGCCGA GCGCGAGGGC 
CACGAGCCGA CGAGCGAGCG CGTGACCGAG AGTGGGCGAA CGAACGGTTC CGGAACGCCG 
ATGACAGTCA GGCTCGGCCG GGCCGAAGAC GGCTTTTACG TCGAAGACGA CGGGCCCGGC 
ATCCCGCCGG CGGATCGCGA AGACGTCTTC GAATACGGCT ACACGACCGA CGAGGACGGC 
ACCGGCCTCG GATTGGCGAT CGTCGAAGCT ATCGCAAACG CTCACGGCTG GGACGTCACG 
GCGACCGAGG GAAGGGAGGG CGGTGCCCGT CTCGTCTTCG AGGATGTCGA CGTCGTCGAG 
CCCGCGGCGC AGGGCGATTG A 

 

Protein sequence

MLYWTLYLAA LLGASGFAVA IVAWLWRRER DLSTNLFLVI AAVQAVSGVL VTAELMTASR 
SLSIVVFGLQ NAVLAGVTPA FFLFVLASLG YRRHLTRPVI GLVFGIFAVS GLIQLTDPVH 
GLYWAEYTVT DSTFHYVAGE PTNLSFLLVL PQMLFYYVAM GLLGANVLFG SGKRRRQSAA 
LFVGFLPAFV ITTIWSMGVL LGPINGALVI GGTWSLAVIA WAVFRQQLFD VVPMARETVF 
EALEEVVIVV DRRQRILDYN AGAAETFPEL ATADGGALGA VVPSIVDANG SDTGGTNSEQ 
GQKATSVDEN GVGDADHPFV DSFTRHVDGE PREYEVSVTP ISVSDTTGGY AVVVRDVTER 
RKRVRHLRQQ TAQLERFAET LSHDLRNPLS VARGRIDLAQ ETGEEAHLET AAEALERIEQ 
LIEDTLTLAR EGQAIEDREP VELGELARNA WATTDTGEAS FEVMPDAEMT VYADHSRLRT 
VFENLFRNAV EHSSTNPDSQ TRQDGVEHSS TNGDSNAPQE PAERRPMADE QPEQPADRGS 
IEATPDTATP LMRGNAEREG HEPTSERVTE SGRTNGSGTP MTVRLGRAED GFYVEDDGPG 
IPPADREDVF EYGYTTDEDG TGLGLAIVEA IANAHGWDVT ATEGREGGAR LVFEDVDVVE 
PAAQGD