| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1552 |
|---|
| Symbol | |
|---|
| ID | 8383831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1526436 |
|---|
| End bp | 1526891 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644972614 |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_003130460 |
|---|
| Protein GI | 257052627 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2402] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGG CCGGCGCGAC GCCGCTGTTC GTCGATACGG GCGCGTTTTT CGCGTCCTTC
GTTTCGAACG CGCCACGTCA CGATCAGGCA CGAGCAGTCA TGGATGCGAT CGGGGACGAT
AGACTGCACT TTCGACCGCT GTACACGACG AACTACGTCC TGAGCGAACT CGCGACGCTC
GTGTTGCGAA AGGCCGGCCA CGAGCGGGCG AGTGCGACGC TGTCGTGGAT TCGGGACTCG
GATGCGGTGA CAATTCTGCA CCCGGATGCA ACGACGTTCG GTGCCGTCTG TGCGGCGTTC
GACCGGTACG ACGACCAGCA GATCTCCTTC GTCGACCACG CGACGGCGAC GCTGGCGCGT
GAGCACGACG TCGAATACGT CTTCGCGTTC GACACTGACT TCCGGACGCT GGGGTTGTCG
CTCGTCCCTG CCGACATCGA TATGCCGGAC GTGTAG
|
|---|
| Protein sequence | MSGAGATPLF VDTGAFFASF VSNAPRHDQA RAVMDAIGDD RLHFRPLYTT NYVLSELATL
VLRKAGHERA SATLSWIRDS DAVTILHPDA TTFGAVCAAF DRYDDQQISF VDHATATLAR
EHDVEYVFAF DTDFRTLGLS LVPADIDMPD V
|
|---|
| |