Gene Huta_1546 details

Gene Information

• Locus tag: Huta_1546
• ID: 8383825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1520657
• End bp: 1521307
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644972608
• Product: hypothetical protein
• Protein accession: YP_003130454
• Protein GI: 257052621
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1468] RecB family exonuclease

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACGTGC CCACGTTCCG CGAACTCGCG ACCGCAGCCT ACTGCCCACG CAAGTACTAC 
TACCGCCAGC GGGAGTCAAC CGACCTCAAG GTTCCGGCCG AGGTCGAGAC GAAGCGGGAA 
CTCGCGTTCG AATATCCGAG ACTACTGGAC GGTGGCCTCT CGGGGGCACC CATCGCCGTC 
ACACCGACCC AATTTCGCTC GCGGTTGAGC CGGGTGAAAG CCAGCCTCGA TGCCTGGGAC 
AGTCTCGTCG AGGACCCCGA CCGGGACGTG CTTCTGGAGG GACGGGACTG TCGCGGGATC 
GCCCACAAAG TGCTGGCGGA TCCGGTCGCG CCATCGCTGG TGTTCACCGG CGCGCCACCC 
GAAAACGGCG TCTGGGAGCC CCAATCCGTG CGACTGGTCG CCGCCGCGCT CGCGCTGGCC 
TACGAACGGG AGCGACAGGT GGCCGTCGCC TTCGCCGAGT ACCCGACCCA CGGAATCGTC 
CGGCGCGTTC CGCTGTCCGC CCATCGGCGG GCGACCTATC GCGCGGCGCT CCGAACTGTC 
GAATCCATCG ACGGCCCGCC GCCACGAGCA GACAACCGGA CCAAGTGCGA GCCCTGCGAG 
TATCGCGAGA AGTGTGGCGT CAAAACGCGG TCGCTCCGGT CACTCCTGTG A 

 

Protein sequence

MDVPTFRELA TAAYCPRKYY YRQRESTDLK VPAEVETKRE LAFEYPRLLD GGLSGAPIAV 
TPTQFRSRLS RVKASLDAWD SLVEDPDRDV LLEGRDCRGI AHKVLADPVA PSLVFTGAPP 
ENGVWEPQSV RLVAAALALA YERERQVAVA FAEYPTHGIV RRVPLSAHRR ATYRAALRTV 
ESIDGPPPRA DNRTKCEPCE YREKCGVKTR SLRSLL