Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1544 |
Symbol | |
ID | 8383823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 1519083 |
End bp | 1519922 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644972606 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_003130452 |
Protein GI | 257052619 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCCTCA GCGGGTCGGC CTCACAGACC CTCGCTGCGA GACTGGCGGA CGAGCTCGGG GAATCGCTCG GCGCGACCAC CACCAAGCGG TTTCCGGACG ACGAACTCCA CGTCACCGTC ACGGAACCCA TCGACGAGCG AGCGATCATC GTCGCCTCGA CTGTTTCGAG TGACGCCCAC ATCGAACTCC TCCAGCTCCA GGACGCCGCC CGCCAGGCGG GGGCCGACGA GGTGGTCACT GTCCTGCCGT ACATGGGGTA TGCACGCCAG GACCAGACGT TCGAACCCGG CGATATCATC TCGACGCGCG CCGCTGCGCG CGCGATCTCG ACCGGAACCG ATCGCGTCCT GACGGTCACG CCCCACGAGA AGAACGTCGC CTCGTTTTTC GACGTACCGA CGACGGTGAT CGACGGCGCA CCGCGACTGG CCGACCCGCT GCCCGCCGAC CTCACCGACC CGCTGTTCCT CTCGACAGAC GCCGCCGCCG CCCCGCTTGC GACGAGCGCC CGTGACGCCT ACGGCGCCGG CGACAGCGAC CACCTGACAG ACGCGACCGA CGGCGAACGC CCGGCACCGA CCGAGGAGAC GATCGCCGGG CGAGACGTCA TCGTCGTCGA CGACATCGTC GGCACCGGCT CGACGATGTC CGGGGCAGTC GCCGTGGTCG CCGACGGCGA CGCCGAGCGA ATCTTCGCGA CCTGCGTCCA TCCGGTGTTC GCGACGGGGG CACTCAGCAA GATCGCCCGC GTCGGTGCCG AGTCCATCTA CGGCACGGAC ACGCTCGAAC GCGTCATCAG CGACGTGAGT GTCGCCTCGA CGATCGCCGA CGCGCTGTGA
|
Protein sequence | MILSGSASQT LAARLADELG ESLGATTTKR FPDDELHVTV TEPIDERAII VASTVSSDAH IELLQLQDAA RQAGADEVVT VLPYMGYARQ DQTFEPGDII STRAAARAIS TGTDRVLTVT PHEKNVASFF DVPTTVIDGA PRLADPLPAD LTDPLFLSTD AAAAPLATSA RDAYGAGDSD HLTDATDGER PAPTEETIAG RDVIVVDDIV GTGSTMSGAV AVVADGDAER IFATCVHPVF ATGALSKIAR VGAESIYGTD TLERVISDVS VASTIADAL
|
| |