| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1522 |
|---|
| Symbol | |
|---|
| ID | 8383801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1498456 |
|---|
| End bp | 1499673 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644972584 |
|---|
| Product | TrkA-C domain protein |
|---|
| Protein accession | YP_003130430 |
|---|
| Protein GI | 257052597 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3273] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.551094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCGG GTGAGGACGT CACGTACGAA CCGGTCAGCG TCAAGGACGT GCTGGCCGAG
ATGAAAGACA CCGCCGAGTT GCTGATCGAC CTCTCCTATT CGGCGGTGTT GCTCGGCAGC
GACGAAATCG CCGAGGAAGT CCTCGCCCTC GAAGAGCGTA TGGACGTCCT CCACCTCCGG
GCACGGATGA GCCTCCTCAT GGCGGCCCGC AACCCCGAGG ACGCCGAGGC GCTGGCCCCG
GTGCTGGGTG TCGTCGGTGC GGCGGAGAAG ATCAGCGATG CGGCGGGCGA TATCGCGAAG
GTCGTCCTGG AAGATATCGG CCTGCCGGCG GCGATGCGGG CGACTCTGCC GGAGGCAGTC
GAGACGCTGG TCCGGGCGAC GGTGGCGGCC GACTCGACGT ACGCAGACCG GACGCTCGGC
GGTCTCAACC TCGAAACCGC GACGGGCGTC CGCATCATCG CGATCCGTCG GTCTGGGGAG
TGGCTGATGA ACCCCGACGC CGAGACGACG CTCCGGTCGG GTGACGTGCT GCTGGCAAGG
GGGCCCGAGG AGGGCATCGC CGAAGTCTAC GCGGCGACCA CCGGCGGGAC CTACGAGCCC
CCCGCGCCGC CCGAGAGCGA CATCGAGGAT CTGGAGCGGG CGGTCGACTC GATAGTCCTG
ATGAAGAACA TGAGCGAACT CGCGGTCGAC CTGGCCTACG GCGCGGTGCT GTTCGACAGC
GAGGCCGTCG CCGAGGAAGT CCTCGAACTC GAGGCCGAGG TCGACGCCCT CCAGTCCCGT
TTCGAGGCCT GGACGCTCCA GGCTGCCGGC CGGGTCGACG ATCCCATCGC CCTCCGTGGG
CTGGTCCACC TCGCGCGCTC GACGGAGGTC ATCTCCGACG CCGCCCTCGA GATCAGCGAA
GGCGTGCTCA GGGGCCTCGG CACCCATCCC GTCGTCGAGG CGGCCATCGA GGCGAGCGAC
GAGGTGATCG TCCGGGAGAC TGTTGCCGAT GGCAGCGACC TCGACGGCGC GACACTGGGC
GATCTCGAGG TCAAGACCCG GACGGGGATG CGCGTGATCG CCGTCCGCCG GCCGGCGACC
CATCCGACCG GCAAGCATTC GACCGATTGG GAACTCTCGC CGGGACCGGC AACGACGATC
GACGCCGGTG ACGTGGTGAT CGCGAAGGGA ACACGGAGCG GCGCGGAGCG GTTGGGCGAA
CTGGCTGGCA GCGAGTGA
|
|---|
| Protein sequence | MASGEDVTYE PVSVKDVLAE MKDTAELLID LSYSAVLLGS DEIAEEVLAL EERMDVLHLR
ARMSLLMAAR NPEDAEALAP VLGVVGAAEK ISDAAGDIAK VVLEDIGLPA AMRATLPEAV
ETLVRATVAA DSTYADRTLG GLNLETATGV RIIAIRRSGE WLMNPDAETT LRSGDVLLAR
GPEEGIAEVY AATTGGTYEP PAPPESDIED LERAVDSIVL MKNMSELAVD LAYGAVLFDS
EAVAEEVLEL EAEVDALQSR FEAWTLQAAG RVDDPIALRG LVHLARSTEV ISDAALEISE
GVLRGLGTHP VVEAAIEASD EVIVRETVAD GSDLDGATLG DLEVKTRTGM RVIAVRRPAT
HPTGKHSTDW ELSPGPATTI DAGDVVIAKG TRSGAERLGE LAGSE
|
|---|
| |