Gene Huta_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1463 
Symbol 
ID8383742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp1433818 
End bp1434453 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content68% 
IMG OID644972526 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_003130372 
Protein GI257052539 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACT GGCGTGTCTA CCTCGTCACG CAGGCGTCGC TGTCGGGCGA TCGAACGACA 
CCCGAGATCG TCGAGGCGGC CATCGAGGGC GGCGTCGACG TCGTCCAACT CCGCGAGAAG 
GACGTGAACG CCCGCGAGCG CTACGAGATG GGACGGGAAG TGCGCGAGCA CACGCGGGAG 
GCGGGCGTAC CGCTGATCGT CAACGACCGT GTCGACCTCG CACTCGCACT CGAGGCCGAC 
GGCGTCCACC TCGGCGACGA GGATCTACCC GTGGCTGTCG CCCGCGAACT CCTCGGCGAG 
GACGCGATCA TCGGCCGGTC GGTGTCGTTC GTCGACGACG CCCGCGAAGC CGAAACAGCC 
GGCGCGGACT ACCTCGGCGT CGGCGCGATC TTCCCGACGG GCTCGAAGGA CGACATCGAC 
GACGCGGAGT ACGCGATCGG GATCGACCGT GTGGCTGCAA TCGTCGACGC CGTCGACATC 
CCAGTCGTGG GAATCGGGGG CGTCACCGCC GAGAACGCCG ATAGCGTGAT CGACGCCGGG 
GCGGCGGGGG TTGCCGTCAT CACCGAGATC ACGAACGCCG ACGATCCGGA GGCGGCGACC 
GGAAGGCTGA TCGACGCCGT CTCGAAGGGG CAGTGA
 
Protein sequence
MTDWRVYLVT QASLSGDRTT PEIVEAAIEG GVDVVQLREK DVNARERYEM GREVREHTRE 
AGVPLIVNDR VDLALALEAD GVHLGDEDLP VAVARELLGE DAIIGRSVSF VDDAREAETA 
GADYLGVGAI FPTGSKDDID DAEYAIGIDR VAAIVDAVDI PVVGIGGVTA ENADSVIDAG 
AAGVAVITEI TNADDPEAAT GRLIDAVSKG Q