| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1453 |
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| Symbol | |
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| ID | 8383732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1424450 |
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| End bp | 1425529 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644972516 |
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| Product | CRISPR-associated protein, Csh2 family |
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| Protein accession | YP_003130362 |
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| Protein GI | 257052529 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02590] CRISPR-associated protein, Csh2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC CCACACAGAC CGTCGAGAAC CGTTCCGAGA TCGTGTTCCT GTACGATGCC
GTCGACGCGA ACCCGAACGG CAATCCGCTG AGCGGATCGA ACAGGCCGCG GATCGATCCC
CAGACCCAGC AGGCGATCGT CACGGACGTT CGGCTGAAGC GGTACCTCCG CGACCAGCTG
GACGACGACG GCCACGGCGT CTACATCCGG AACGTTCAGG AAGAGGGCAC GCAGTACACA
CGCGCCGAAC TCCTCGAAGA CAGGCTGAAG GCCGTCGATC CCGACGATTA CGACCTCGAT
GACGACGAGG CAGCGGCGCA GTTCCGGGAC GACGTCTTCG GGGAATACCT CGAAGAGAGT
GCCGACGTAC GCTACTTCGG CGCGACGATG TCTGTCGATA CTGACAATGC GTACGCGAAA
CATCTCCCGG ACCACTTCAC TGGCCCAGTT CAGTTCTCGC CAGGCAAGTC GATCCACGCT
GTCAACGAAA ACGAGGAATA TGACAGTCTC ACCAGCGTGA TCGCCACCCA GGAGGGGAAA
GAACAGGGTG GGTTCGACCT CGACGACCAC CGCATCCAGT ACGGGCTCAT TCGGTTCCAC
GGACTCGTCG ACGAACACGG GGCCGCCGAC ACGAATCTCA CGCGAGCGGA CGTAGAGCGT
CTCGATACAC TCTGTTGGCG GGCGATCAAG AACCAGACCA TCAGTCGGAG CAAAGTCGGC
CAGGAGCCAC GTCTCTACTG TCGCGTCGAA TACGGCGAGG AAAGCTACCA TCTCGGCGGC
CTGGACAAGG ATCTCACCCT TGACGACGAG GCCTCGAAGG ACCACGACGA ACTCCGAAAC
ATCCGCGATC TTACGCTGGA GATCGATGAT TTCGTGGATC GGATCTCGAA CGCCAGCGAC
CAGATCGAAC GCATCCGGGT GGTCGCGAGC GACGTCCTGG AACTCTCTCA CGGGACCGAC
AGCGGTGGGC CGGACCTCCT GTACGACGCG CTTCGAACGG CAATCGGACC GGACCGAGTC
GATGTCGTCG ATGTCTACGA CGAGTATCCT GAAACGCTGC CACAGAGCAC CGGCGAGTGA
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| Protein sequence | MSEPTQTVEN RSEIVFLYDA VDANPNGNPL SGSNRPRIDP QTQQAIVTDV RLKRYLRDQL
DDDGHGVYIR NVQEEGTQYT RAELLEDRLK AVDPDDYDLD DDEAAAQFRD DVFGEYLEES
ADVRYFGATM SVDTDNAYAK HLPDHFTGPV QFSPGKSIHA VNENEEYDSL TSVIATQEGK
EQGGFDLDDH RIQYGLIRFH GLVDEHGAAD TNLTRADVER LDTLCWRAIK NQTISRSKVG
QEPRLYCRVE YGEESYHLGG LDKDLTLDDE ASKDHDELRN IRDLTLEIDD FVDRISNASD
QIERIRVVAS DVLELSHGTD SGGPDLLYDA LRTAIGPDRV DVVDVYDEYP ETLPQSTGE
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