Gene Huta_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1450 
Symbol 
ID8383729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1420483 
End bp1421061 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content60% 
IMG OID644972513 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_003130359 
Protein GI257052526 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGAC ACACTGACGA GCGGACCGGC GAAACCGATC CCGTCGATCT CCTCCTCGAA 
TCAGCACGCG ACGAGGCCGT CGAGTCGTCG TTTCACGTCA CTGGTGTGAT GATGCAATAT
TATGAAGTGT GTGAGCGCGA ACTCTGGTTC GAGAGCCGCA ACATCGAGAT CGACCGGGAG
AACCCGAACG TCGTCCGGGG AACGCACGTC GACGAGACGG CCTACGACGA GAAACGACGG
AACCTGAGTA TCGACGGTCG GATCGCGCCC GATCTGCTGG ACGACGGGCG CGTCGTCGAG
GTAAAGCCGT CCTCGACGCT GGTCGAGCCG GCACGCCTCC AGTTGCTGTA CTACCTCTGG
TATCTCGATC GGGTCGTCGG CGTCGAGAAA GAGGGTGTTC TGGCTCATCC GACCGAACGC
AAGCGCGAAT CGGTCGAGCT GACAGACGAA ACTGTACAGC AAGTCGAGGA CGCGATTCGC
GGGATTTACG ACGTCGTTCG AAGCGAGACG CCACCGCCCG CGACGGAAAA GCCGTTCTGT
GAGTCGTGTG CGTACTACGA CTTCTGCTGG AGCTGTTGA
 
Protein sequence
MSGHTDERTG ETDPVDLLLE SARDEAVESS FHVTGVMMQY YEVCERELWF ESRNIEIDRE 
NPNVVRGTHV DETAYDEKRR NLSIDGRIAP DLLDDGRVVE VKPSSTLVEP ARLQLLYYLW
YLDRVVGVEK EGVLAHPTER KRESVELTDE TVQQVEDAIR GIYDVVRSET PPPATEKPFC
ESCAYYDFCW SC