Gene Huta_1429 details

Gene Information

• Locus tag: Huta_1429
• ID: 8383708
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1399063
• End bp: 1399527
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644972492
• Product: Protein of unknown function DUF1628
• Protein accession: YP_003130338
• Protein GI: 257052505
• COG category: [S] Function unknown
• COG ID: [COG3430] Uncharacterized protein conserved in archaea
• TIGRFAM ID: [TIGR02537] archaeal flagellin N-terminal-like domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.747471
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGACC GTGCCGTCTC CCCCGTCGTC GGCGTCATCC TGATGGTGGC CCTGACCGTG 
CTGTTCGGGG CGACCGTCGG GACCATGGTA CTCGGGACGG CCACGCCCGA CCGCGGGACG 
ACAGTTCGAC TCTCGGCGAA TGCCGACGCG GCGGGGAACA CGATCGCACT CACGCACGAG 
GGCGGTGACC CGATCGACGT CTCGACGATC GACGTGGCGA TCACCGTCGA CGGAACGCCT 
CTCGACGACC AGCCGCCGGT CCCGTTCTTC GCGGCGACGG GGTTCGTGAG CGGCCCGACC 
GGCCCGTTCA ACAGCAGGTC GACGGGCGAG TGGACTGCCG GCGAGACCGC GACCCTCGAA 
CTCGCCACGA CGAACGACCC ACTACTCACA GAAGACGTGC GCGTGACGGT CACCGTCTCA 
GAGGCGGACA CCGTACTCGC CAGACTCGAA ACGACCGCAG CGTAG 

 

Protein sequence

MADRAVSPVV GVILMVALTV LFGATVGTMV LGTATPDRGT TVRLSANADA AGNTIALTHE 
GGDPIDVSTI DVAITVDGTP LDDQPPVPFF AATGFVSGPT GPFNSRSTGE WTAGETATLE 
LATTNDPLLT EDVRVTVTVS EADTVLARLE TTAA