| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1425 |
|---|
| Symbol | |
|---|
| ID | 8383704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 1393980 |
|---|
| End bp | 1395332 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644972488 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003130334 |
|---|
| Protein GI | 257052501 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.581909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGC GATTTCTCGT CATCGGCGGC GACGCGGCGG GGATGAGCGC GGCCAGCAAG
GCCAAGCGGG AGGATCCGGA CCGCGAGGTC GTCGTCCTCG AACGGAGCGA ATGGGTGTCC
TACGGGGCCT GTGGCCTTCC ATACTACGTC AAGGGGGAGA TCGACTCTCT CGACGATCTC
ATCGCGATCC CGGCCGATCG CTTCCGGGAG GAGCGGAACA TCGACCTCCG GACCGGTCAC
GAAGCGATCG GGATCGACCG GAGCCGAAAG GAAGTCACGG TCGAGACCGA CGCTGGTGAG
GAATACGGGA TCGGCTACGA CGATATGCTG ATCGCGACCG GCGCAGGCGC GCTTGAACCA
CCGATCGATG GCCTGGACGC CGAGAACGTC TTCACCCTCC AGGAGATGAA CGCAGGGCGA
ACGCTCAAGG AGGCTATCGA GACCGGCGCG TACGACCGCT TCGGCATCAT CGGCGGTGGA
TACATCGGCA TCGAGATGGC CGAGGCATTC CGGGGCCGGA GCATCGACGT GACGTTGTTC
GAGATGCGCG ACCACGTCCT CCCGCCGTTC GGCGCGTCGG CCGCCGAGAC CGTCGCAGGC
GAACTCGAAG ACAACGGTGT CGACGTGCGG ACGAGCACGC GCGTACAGGC CCTGGAAGGC
AAGAACGCCG TCGAGCGGAT CGTCACCGAC GATGGCGCGG TCGAGGTGGA CGCAGTGCTG
GTCGCGGCCG GCGTCGACCC GAACGTCGAA CTGGCCGAAC AAGCGGGGAT CGACCTGGGA
CCGACGGGCG CGATCGCCAC CGACGCGTAC GGCCGGACCA GCGACGACGC CGTCTACGCG
GCGGGCGATT GCGCGGAGAT GACCCACGCC GTGACGGACG AGCCAGCCCA CGTCCCGCTG
GCGCTGACGG CCAACCGGGC CGGGCGCGCC GTCGGCGCGA CGGTCGGCGG CGACCCGACG
CCGGTCGGCG ACATCGCCGG GACGGCCGTG CTCAAGGCGT TCGATCTTGC CGTCGCCCGG
ACGGGGATGC TGGACGAGGA GGAACTCCGT GACGCCGGTT TCGACCCCGT GTCGGTGACG
ATCACGTCAG CCTCGCGGGC CCACTACTAC CCCGGCGGCT CGGAGATCGA GGTCACGCTG
GTCGGCGACG CCGAGTCGGG CCGCGTCCTG GGAGCGAGCA TCGTCGGGCA CGAGGGCGTC
GCCAAGCGGA TCGACCCCAT CGCGACGGCG ATCCAGTCCG ACCTGACCGT CGAGGACGTC
GAATATCTCG ATCTCTCGTA CGCGCCGCCC TTTGGGCCGA CCTGGGATCC GATACTCACG
GCGGCGAAGG TTCTCAACGG GAAACTCGAC TGA
|
|---|
| Protein sequence | MSERFLVIGG DAAGMSAASK AKREDPDREV VVLERSEWVS YGACGLPYYV KGEIDSLDDL
IAIPADRFRE ERNIDLRTGH EAIGIDRSRK EVTVETDAGE EYGIGYDDML IATGAGALEP
PIDGLDAENV FTLQEMNAGR TLKEAIETGA YDRFGIIGGG YIGIEMAEAF RGRSIDVTLF
EMRDHVLPPF GASAAETVAG ELEDNGVDVR TSTRVQALEG KNAVERIVTD DGAVEVDAVL
VAAGVDPNVE LAEQAGIDLG PTGAIATDAY GRTSDDAVYA AGDCAEMTHA VTDEPAHVPL
ALTANRAGRA VGATVGGDPT PVGDIAGTAV LKAFDLAVAR TGMLDEEELR DAGFDPVSVT
ITSASRAHYY PGGSEIEVTL VGDAESGRVL GASIVGHEGV AKRIDPIATA IQSDLTVEDV
EYLDLSYAPP FGPTWDPILT AAKVLNGKLD
|
|---|
| |