Gene Huta_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1408 
Symbol 
ID8383687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1376895 
End bp1377908 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content67% 
IMG OID644972471 
Producthypothetical protein 
Protein accessionYP_003130317 
Protein GI257052484 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.34075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACAGC GCGATCCCGT CGAGACTGCC GCCGACGGCT CGCTCGACCT GTACGATATC 
GCCGACTGGG AGGTCCGCGG GCGGCTCGAT CGGCTCGCGG TGATACTCCA CGCGAGTGCG
CTCACGCTCG CCCGGGTGAC GATCGTCCTG GTTGCGATCT CGATCCTGCT CTCGCAGTTC
GTCCTCGGCG GACTGGGTGC AATCACGGAT CCGACCGTCG GCGCGGTGAC TGCCCTCTCG
GTCGTGCCCG CTGTCGGGCT GGCGGGATAC GTCTGGCGGG CTGACGCCAC CGCCCGCGAG
CCGTTGGGCC TCCTAGTCGC AACCTTTCTC CTCGGCGTCC TCTTCGCCGG CTTCGCGGCC
GTCATCAACG CGATGTTCGC CCCTGCCGCG TTCGTGCTCA CCGAGGCCGC CGGCGTCGAG
GCACTCGGCC TGGTGGTCGT CTTTTACGTG ATCGTCGGCC CGGTCGAGGA AGGCGTCAAG
CTTCTGGCAG TCCGACTGCA CGCCTTCCGT GACGTCCGTT TCGATGCCGT CGTCGACGGG
GCCGTCTACG GAGCCATCGC CGGGCTCGGG TTTGCGACCA TCGAGAACGC GCTGTACATC
ACCGAGACGA CCGGTGACGT CGGCGTCGGT GTGTTCGCAG CCGGTGGGAG TGTCGTCACC
GTGCGGGCGC TGGCCGGGCC GGGCCACGTC ATCTACTCGG CGTTCGCCGG GTATTACCTC
GGGCTGGCGA AATTCAACCC GGTCCAGGCC GGCCCCATCG TCGTCAAGGG ATTGCTGATC
GCCGCGTTCG TCCACGGGAC CTACAACGCG CTCGTCTCCG TGCTCCCGGC GTTCCTCGCG
GACGTAGTAG GGATCTCGCC CTTCTTCGCC TTTGTCGGCT TCGTGATCGT CTACGACGGG
GTGTTCGGCT ACGTGCTCGT TCGAAAACTC CGCGCCTATC GCCGGGCCTA CCAGCGCACC
ACTGTCCGGA AGGATCGCTC TCTCCAGCCT GAGCTGACTG AATTCGACCC GTAG
 
Protein sequence
MRQRDPVETA ADGSLDLYDI ADWEVRGRLD RLAVILHASA LTLARVTIVL VAISILLSQF 
VLGGLGAITD PTVGAVTALS VVPAVGLAGY VWRADATARE PLGLLVATFL LGVLFAGFAA
VINAMFAPAA FVLTEAAGVE ALGLVVVFYV IVGPVEEGVK LLAVRLHAFR DVRFDAVVDG
AVYGAIAGLG FATIENALYI TETTGDVGVG VFAAGGSVVT VRALAGPGHV IYSAFAGYYL
GLAKFNPVQA GPIVVKGLLI AAFVHGTYNA LVSVLPAFLA DVVGISPFFA FVGFVIVYDG
VFGYVLVRKL RAYRRAYQRT TVRKDRSLQP ELTEFDP