| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1399 |
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| Symbol | |
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| ID | 8383678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1369982 |
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| End bp | 1371274 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644972462 |
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| Product | integrase family protein |
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| Protein accession | YP_003130308 |
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| Protein GI | 257052475 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.433904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAATC GAGACGAACC GTCCCGACGG TACGAACGGG CGCGAGAGAA ACTTGATGAC
GATCACGAGA GCGGGGAACT AACAGACGAT GAATACAGCC ACATCACCGA ATTTCTCGAT
GCAAAAGACC CCGACGTATT GAACGGTCAC GGCGACACAT TGTCGTATCA GACGTTGCGG
GGCTATTGTC GTTTACTCGC CTGTGCAGCC CGACGGCTAC CCGAAGATAC CACACTGACG
ACAGCGACAG AAGACGACAT CAATGGACTC ATTTCCCGCT TTGCCAAGGG AAACCACCCC
GCGGTCAAAG ACGACGGTGT ATCACACGCG ACGCAACGAC AGTATCAGGC AACGCTTCGA
GCGTTCTACA ACTACCACGA GGAGCTACCT GCCGATCCCG ACGGGATCAC ACTGAAACAG
ATAGATGATT CACCCGTCGA TGAGCGGGAC ATTTTCGACC ATGATGATGT GGAAGCGATG
CGTGAGGCCT GTTCAAATAC CCGTGATCGG GCCATACTGG AATTGCTTTT GAACACGGGC
CAACGCATTC GTGCGATTCA AACGCTCCGT GTGAAGGACG TGAACCTTGA TGAAGGTGTG
TTCTGGTTGA ACGATGAGGC CGACGGACTC AAACACGCAG AGGGGAAACG ACCGTTGCTC
GGCGCGAAAG CCCCTGTCCG TCGGTGGTTG GATAATCACC CGGCACCCGA AAACCCGGAT
GCCTATCTTA TCACTCATCT CCCGTCATAC CGCAATACGG ATGCGACGAC GCCACTGAAT
CAAAACTCGA TACGGAAGCG CCTTCGGAAG ATCGGGAACG AGGCAGGGGT TGATAAGCCG
ACGAATCCTC ACAACTTCCG ACACTTCGCG GTGACGACGA TGTACCGCGA TTACGACATG
GACGCGGACA CGATTCGGTT CATCATTGGT CATGGCGAGG ACAGCCGAAT CATGGAAACG
ACATACCGTC ACTTGACCGA CGATGATTAC ATCAAGAAAG CTGAAATTGC GGCAGAGATT
CGAGAACCCG ACGACGATAG TCCGCTATCC CCCAACCGTT GTTTGACCTG TGACGAACCT
CTTGCCAAAG ACGCGAAGGC CTGTCCAAAC TGTGGCCATG TGTATACGCC CGATGCGAAG
GCGGTTCAGG ATACGATTGG CGAGAGTATG AAAGAGTCCT ACAAGGACAC CGAACCGGGG
AGTGACACCC AGGCGAAGGT CGAACAACTT GATGACTTGT TAGACGATCC GGATGTGAAG
GCCGCGCTCT TGGAGAAATT GGCCGACGAG TGA
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| Protein sequence | MGNRDEPSRR YERAREKLDD DHESGELTDD EYSHITEFLD AKDPDVLNGH GDTLSYQTLR
GYCRLLACAA RRLPEDTTLT TATEDDINGL ISRFAKGNHP AVKDDGVSHA TQRQYQATLR
AFYNYHEELP ADPDGITLKQ IDDSPVDERD IFDHDDVEAM REACSNTRDR AILELLLNTG
QRIRAIQTLR VKDVNLDEGV FWLNDEADGL KHAEGKRPLL GAKAPVRRWL DNHPAPENPD
AYLITHLPSY RNTDATTPLN QNSIRKRLRK IGNEAGVDKP TNPHNFRHFA VTTMYRDYDM
DADTIRFIIG HGEDSRIMET TYRHLTDDDY IKKAEIAAEI REPDDDSPLS PNRCLTCDEP
LAKDAKACPN CGHVYTPDAK AVQDTIGESM KESYKDTEPG SDTQAKVEQL DDLLDDPDVK
AALLEKLADE
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