| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1389 |
|---|
| Symbol | |
|---|
| ID | 8383668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1362166 |
|---|
| End bp | 1363374 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644972452 |
|---|
| Product | putative circadian clock protein, KaiC |
|---|
| Protein accession | YP_003130298 |
|---|
| Protein GI | 257052465 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.201888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ACGAATCAGA CGAGGACTGG TTCGAACAGG CGATCAGCGG AGACCGTGAC
GTTGATGACG GTCTCCCCAC GCGGACTGAC GAGGACTCCC CGACTGAGGA AACGCCCGAC
GATTGGTTCG AGGGGGACGA GGAGCATTCC ACCGAGGACG ACCGGGACAC TCCCGAGGCC
CAAACGGTCG ATCCATCCGA CGAGACCGAC GCTTTTGACC AGTCGACGAC ATCTTCGACG
TCCGCGGAGG CTGAAGCCGA GACGGCCACA CCGGGCGGAG AGTCGGAAAC GGCCACACGG
GACGGAGAAA CCGGGACGGT CGCCCCAGAT GGAGAACCGG AGACTGCCAT CACGGAGGAA
GCGCCGGACT TCGAGGCCGC GGACAGCGGC GGCTCGTTGT TCGACGAGGA CTTCGGGAGT
GCGCTGGAGT CCGCCGGCGG ACCCGGTGGT GACGACGCAG GTGGCGGGTC CGATCCATCC
GAAACCGAAT TCGACGACGA CTCCTTCGAA TCTGAGATCC CGCGGATCGA TCTCGGGATC
GAGGGGCTCG ACGAGATGAT TCAGGGCGGC GTTCCCAGCC GCCACTTGAT GGTTGTCATC
GGGTCGCCGG GGACCGGCAA GACCACGTTC GGCCTCCAGT TTCTCCATCA CGGACTCCAG
CAGGGCGAGA ACGCGGTGTT CATCACGCTC GAGCAGAGCC GCGAGAGCAT CCTCGACACC
GCCGACGAGC GCGGCTGGGA GTTCGACCGC TACGAGCGCG AGGATCGACT CGCGATCGTC
GACCTCGATC CCGTCGAGAT GGCAAACAGT TTAGAGAACA TCCGGGGGGA GTTCCCCCAA
CTTGTCAGGG AGTTCGGTGC CGACCGACTG GTGCTCGACT CGGTGTCGCT GCTGGAGATG
ATGTACGATG ACCAGGCCCG CCGCCGGACG GAGGTCTTTG ACTTCACGCG CTCGCTGAAG
GAGGCCGGTG TCACGACGAT GTTCACCAGC GAGGCCAACG AGGACAACCC ATACGCCTCC
AGACACGGCA TCATCGAGTA CCTGACGGAC GCCGTCTTCG TCCTCCAGTA CGTCCGTGGG
GACACCCAGG AGACCCGCCT GGCCGTCGAG ATCCAGAAGA TCCGCAACGC CAACCACTCG
CGCGCCACGA AACCCTACGC GATCACCCTC GACGGCATCG ACGTCTACCA GCAGGCCAGT
ATCTTTTAA
|
|---|
| Protein sequence | MSDDESDEDW FEQAISGDRD VDDGLPTRTD EDSPTEETPD DWFEGDEEHS TEDDRDTPEA
QTVDPSDETD AFDQSTTSST SAEAEAETAT PGGESETATR DGETGTVAPD GEPETAITEE
APDFEAADSG GSLFDEDFGS ALESAGGPGG DDAGGGSDPS ETEFDDDSFE SEIPRIDLGI
EGLDEMIQGG VPSRHLMVVI GSPGTGKTTF GLQFLHHGLQ QGENAVFITL EQSRESILDT
ADERGWEFDR YEREDRLAIV DLDPVEMANS LENIRGEFPQ LVREFGADRL VLDSVSLLEM
MYDDQARRRT EVFDFTRSLK EAGVTTMFTS EANEDNPYAS RHGIIEYLTD AVFVLQYVRG
DTQETRLAVE IQKIRNANHS RATKPYAITL DGIDVYQQAS IF
|
|---|
| |