Gene Huta_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1388 
Symbol 
ID8383667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp1361517 
End bp1362158 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID644972451 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_003130297 
Protein GI257052464 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.233429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGACA TCCTTTCGCG GATCGAACAC ACCGTCCTCG GCCCGGAAAC GACACCGGCA 
GACGTCGAGG CTGTCCTCGA CGACGCCAGC GAATACGGCC TGCGCGCGTG CATCCCGCCC 
TGTTATCTCG AACTCGCCGG CGAGTACGCG CCTGACGTCG AAGTAGCGAC CGTAATCGGG 
TTCCCGCACG GCAACCACAC CACGGCGGCG AAAGTCGCGG AAGCCGAGGA CGCTGTCGAG 
GCCGGCGCGG ACGAACTCGA CATGGTCTGT AACGTCGGCC TCCTCAAGGC CGGTGAAGAC 
GACGCCGTCC GCGAGGACAT CGAGTCCGTG GTCGCTGCGA CCCGCAAGCC GGTGAAAGTC 
ATCATCGAGA CGCCGCTTTT GACCGACGAG GAGAAGCACC GCGCCAGTCA ACTGGTCGCC 
GACGCGGGCG CTGACTTCGT GAAGACAGCG ACGGGCTTCG GCGGCGGCGG TGCCACGGTG 
CCTGACGTCG AACTCATGAG CGAGTACGCA CCCGTGAAAG CCAGCGGCGG CGTCGGTTCC 
TGGGCGGACG CAAAAGCGAT GTTCGACGCC GGTGCTGACC GAATCGGAGC CTCAAGCGGC 
GACGTGATCG CCGAAGAATA TTTCGAAGCG CAGGAAGCCT GA
 
Protein sequence
MDDILSRIEH TVLGPETTPA DVEAVLDDAS EYGLRACIPP CYLELAGEYA PDVEVATVIG 
FPHGNHTTAA KVAEAEDAVE AGADELDMVC NVGLLKAGED DAVREDIESV VAATRKPVKV 
IIETPLLTDE EKHRASQLVA DAGADFVKTA TGFGGGGATV PDVELMSEYA PVKASGGVGS 
WADAKAMFDA GADRIGASSG DVIAEEYFEA QEA