| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1349 |
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| Symbol | |
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| ID | 8383626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1320606 |
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| End bp | 1322168 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644972410 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_003130258 |
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| Protein GI | 257052425 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.877509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTAC TGGTCACGGA CCCGATCGAC GACGCCGGGC TGGCACGCCT CCGGAGTGCC
GGCCTCGACG TCGAGACCGA CTTCGACATC GACACGGCGG GCGTCCTCGA GAAGATCGCG
GACGTCGACG CCATGCTCAT CCGCGGGACG GAGATTACCC GCGAAGTCTT CGAGAACGCG
CCCAATCTCA AGATCGTCTC GCGGGCGGGC ATCGGCGTCG ACAACATCGA CATCCCCGCG
GCGACCGACC ACGGCGTCAT CGTCGCCAAC GCCCCCCGCG GGAACGTCTA CGCCGCCGCC
GAGCACACGA TCGGCCTGGC CTTTAACGCC GCCAAGCAGA TCCCACAGGC CCACATGCAG
GTCCAGGCCG GCGGGTGGGA CGGTGCGTCC TTCGACGCGC TCGAACTCGG CGACATGACT
GCCGGGATCG TCGGCCTCGG CCGGCTGGGC CAGGAGGTCG CCTGGCGGCT CGACAACCTC
GGCATGGATC TGCTCGCCTA CGATCCATAT CTCGGCGAGG CCCGGGCCCG CCAGATGGGC
ATCGAACTGG TCGAACTCGA CGAACTCCTC GAACGCGTCG ACATGCTGTC GGTCCAGGCC
CGCCTCACCG ACGAGACCCG CGGGCTGATC GGGCCCGAGG AGATCGACCG CTTCGCCGGC
GACCTGATCG TGTTGACCTC CCGTGGCGGT ATCGTCGACG AGCCGGCGCT CGCCGACGCC
GTCGAGTCCG GCGAGATCGC GGCCGCCGGC GTGGACGTCT TCTCGACGGA GCCGCCCGAG
GACAACCCGC TGCTCGACGT CGAGAACGTC GTCGTGACGC CACACCTCGG CGCGAAGACC
CACAACGCCC AGGTCAACGT CGCCGTCACG GCCGCCGACA GCATCATCTC GGCGCTGGAG
GGCGACCTCG TCCAGAACGC GCTGAACCTC TCCTCGACGG ACGCGAGTTC CGATCCCCGC
ACCCGAGGCT ACGTCGACGT CGCCGAGACG GCAAGCAAGA TCGCCCTCCG ACTCTTCGAG
GGTCGCGTCG AGTCGATCGA GATCGAGTAC GCGGGCGACC TCGCCGACGA GGACACCAAT
CTGGTCACGG CCGCGGTGTT CAACCCCTTC GGCTGGCAGG ATGTCGTCGT CGACGCGCCG
ACCCGGATTG CCGAACAGCG CGGCATCCAG GTCGTCGAGA GCAAGCGCCG CGAGACCGAG
GACTACCAGA GTCTGGTGTC GATCACGGTC AGCGACGGGG TGCGCGAACT CACTGTCAGC
GGGACGCTGT TCGGCGACAA CGAACCCCGA CTGGTCGAGA TCGACGGGTT CAGAGTCGAC
GCGACGCCAT ACGGCCACAT GCTGATCTCG CGCAACCGCG ACGAACCTGG TGTCATCGGC
GCGCTCGGCA GCGTCTTCGG CGAGTACGAC GTCAACATCG CCGGCATGGC TAACGCCCGC
GAGTCGATCG ACGGCGAAGC GATGTCGGTG TACAACCTCG ACGATCCCGT GACGCCCGAG
CTCCTCGAAG AACTCGAATC GGATACCCGT GTCACGGGCG TGACGGCGAT CGACCTGGAT
TAA
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| Protein sequence | MKVLVTDPID DAGLARLRSA GLDVETDFDI DTAGVLEKIA DVDAMLIRGT EITREVFENA
PNLKIVSRAG IGVDNIDIPA ATDHGVIVAN APRGNVYAAA EHTIGLAFNA AKQIPQAHMQ
VQAGGWDGAS FDALELGDMT AGIVGLGRLG QEVAWRLDNL GMDLLAYDPY LGEARARQMG
IELVELDELL ERVDMLSVQA RLTDETRGLI GPEEIDRFAG DLIVLTSRGG IVDEPALADA
VESGEIAAAG VDVFSTEPPE DNPLLDVENV VVTPHLGAKT HNAQVNVAVT AADSIISALE
GDLVQNALNL SSTDASSDPR TRGYVDVAET ASKIALRLFE GRVESIEIEY AGDLADEDTN
LVTAAVFNPF GWQDVVVDAP TRIAEQRGIQ VVESKRRETE DYQSLVSITV SDGVRELTVS
GTLFGDNEPR LVEIDGFRVD ATPYGHMLIS RNRDEPGVIG ALGSVFGEYD VNIAGMANAR
ESIDGEAMSV YNLDDPVTPE LLEELESDTR VTGVTAIDLD
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