| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1331 |
|---|
| Symbol | |
|---|
| ID | 8383608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1303605 |
|---|
| End bp | 1304246 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644972392 |
|---|
| Product | 2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase |
|---|
| Protein accession | YP_003130240 |
|---|
| Protein GI | 257052407 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA TCGAACAGCA ATTCGTCGAC AGCGGGGTCG TGGCAGTGCT CCGGAACATC
GACGCCGACG CGATGGTAGA CACCGTCGAG GCCCTGCATC GGGGCGGCGT GACTGCCTTC
GAAGTCACCG TCGACGCGCG GAACGCGAGC GAATTGGTCG GGGACGTCGT CGAGACGTTC
GACGGCGAGG ACGCGGTCGT GGGTGCCGGG TCGGTGCTCG ACGCTGCCGC GGCTCGGTCG
GCAATCGAGG CCGGCGCGGA ATTCGTCGTC GGCCCCACAC TCGAAGAAGA CGTCATCGAG
ACGGCCAACC GCTACGATAC GCTCGTCGCG CCGGGCGTGA TGACCCCGAC CGAGGCGCTG
CGGGCCGCCG AAGCCGGGGC GGACCTGATC AAGGTGTTCC CGGCCGCGAC CGTCGGCCCG
GGTCATCTCA GTGCGATCCA GGCCCCGCTT GGGGACCTGC CGTTGATGCC GACCGGCGGC
GTCGGGCCGG ACAACGTCGC GGACTTTTTC GAGGCTGGGG CGACCGTCGT GGGTGCAGGC
AGCGCGCTTA TCGATTATGA CGCCATCGAG CGTGGCGACT TCGAGGCCGT CGAAGCACAC
GCTGGCGAGT TCGTCGCGGC GGTCGAAGAC GCTCGCGAGT GA
|
|---|
| Protein sequence | MSDIEQQFVD SGVVAVLRNI DADAMVDTVE ALHRGGVTAF EVTVDARNAS ELVGDVVETF
DGEDAVVGAG SVLDAAAARS AIEAGAEFVV GPTLEEDVIE TANRYDTLVA PGVMTPTEAL
RAAEAGADLI KVFPAATVGP GHLSAIQAPL GDLPLMPTGG VGPDNVADFF EAGATVVGAG
SALIDYDAIE RGDFEAVEAH AGEFVAAVED ARE
|
|---|
| |