| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1309 |
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| Symbol | |
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| ID | 8383586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1282857 |
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| End bp | 1284473 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644972370 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003130218 |
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| Protein GI | 257052385 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGATC GTCCCCCCAG TGACAAGTCG GACGGCAGTG GGACTGACCC ATCATCATCG
TCCGCCAAGG GGCCAGACCC GAATGACGAC GGGCCGGACC TCGACTCGGA CGGTCCCGAG
TCCACAGCCG ACCCGAGCGA TGGGGACGAC TCGGGTGACT CGATCACCCA GGGGAGCCTC
ATCCGGCCGC TGATCGGCCT GGCCTGGCCG ATCGTCGTCA TTCAGCTGTT GCAGGTCACC
TACAACATCG CCGACACGCT GTGGCTCGGC CGACTCTCGG CGGACGCCGT CGGCGCGATC
AGTCTCGCCT TTCCGCTGAT CTTCCTGCTG ATCGCCGTCG CGGGCGGCTT TACGACCGCC
GGGGCGATCC TCGTCGCCCA GTACACCGGT GCGAAGGGTG AGCGGTCAGC CGGCCACGTG
ACCGGCCAGA CCGTCTCGTT CGTCGGATTG CTGTCGGTCG TGATCGGGGT CGTCGGGTAC
TTCTACACCC GCCCAGCGCT CGAACTCCTC CCGAGCGATC CCGAGACGTC GGCGTCGGTC
ATCCCGCTGG CGGCTGATTA CATGGAGGTC ATCTTCATGG GGATTCCGCT GATGTTCGGG
TTTTTCATCT TCTCGGCGCT CATGCGAGGG TACGGCGACA CGCGGACCCC GATGTTCGTG
ATGGTGGTCT CCGTCGGGTT GAACGTCGTC CTCGATCCCT TCTTCATCTT CGGATTTGCC
GGCAATCCCC TGTTCGAGTG GGTCGGCCTC GGCGGCCTGG AAGCGACCCT GGAAGCCGCG
ACTGGCTTTA CCGGCCTCGG TATCGAAGGC GCAGCACTGG CGACGATCCT CTCTCGAGGC
GTCGGCACGG CGATCGGCCT CTGGCTGCTG TTCGGCACGG GCATCGGCCC CGCCGTCACG
TTCGAGCATC TGCGGCCCGA TTTCCCGGTC ATCAGAGATA TCATTCGATT GGGAACCCCG
AGCATGGTCG AGCAATCGAC CAGCGCCCTG GCGATGATCA CGCTGACGGC CATGATCGTC
ACGTTCACGC CGCCAGTCGT CGCCGCCTAC GGCCTGGGCA ACCGGCTCAT CTCGCTGGTC
TTCCTGCCGG CGATGGGGCT GGGCCGGGCG ATCGACACCA TGGTGGGCCA GAATCTGGGA
GCCAACCGGC CGGACCGGGC GTCCCGGGCG ACCTGGCTGG CCGCCGGGAC GGGGGCAGGA
GTCATGGCGG TCGTGGCCGT CGTCGCCGTC GTGTTCACCG AGCCGATCGT CGGCGCGTTC
ATGGGCGACG TGCCCGACGC GGCCGCGACG ATCGCAAACG GCGTCGAGTA CGTCCGGATC
CGCTCGGTCG AGTTCACGTT CATCGGTGTC ACGCAGGTGA TCCTCGGGGC GTTCCGGGGA
GCCGGCAACA CCCGGACGGC GATGGTCATC TCGATCATGA CCCTGTGGGT CGGCCGCGTT
ACCAGCGTCT ACGCCCTCGT GTTCGTCTTC GAGTGGGGCG CGACCGGCGT CTGGGTCGGG
ATGGCGCTTG GCAACATCGT CGGCGCAGTC CTTGGCGTCG CGTGGTTCCT CCGGGGGACC
TGGAAAGAGC GATACATCGA CGAACCGGCC CTCGACGCCG ACGAGGCGGT CTCGTAA
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| Protein sequence | MNDRPPSDKS DGSGTDPSSS SAKGPDPNDD GPDLDSDGPE STADPSDGDD SGDSITQGSL
IRPLIGLAWP IVVIQLLQVT YNIADTLWLG RLSADAVGAI SLAFPLIFLL IAVAGGFTTA
GAILVAQYTG AKGERSAGHV TGQTVSFVGL LSVVIGVVGY FYTRPALELL PSDPETSASV
IPLAADYMEV IFMGIPLMFG FFIFSALMRG YGDTRTPMFV MVVSVGLNVV LDPFFIFGFA
GNPLFEWVGL GGLEATLEAA TGFTGLGIEG AALATILSRG VGTAIGLWLL FGTGIGPAVT
FEHLRPDFPV IRDIIRLGTP SMVEQSTSAL AMITLTAMIV TFTPPVVAAY GLGNRLISLV
FLPAMGLGRA IDTMVGQNLG ANRPDRASRA TWLAAGTGAG VMAVVAVVAV VFTEPIVGAF
MGDVPDAAAT IANGVEYVRI RSVEFTFIGV TQVILGAFRG AGNTRTAMVI SIMTLWVGRV
TSVYALVFVF EWGATGVWVG MALGNIVGAV LGVAWFLRGT WKERYIDEPA LDADEAVS
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