Gene Huta_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1307 
Symbol 
ID8383584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp1280462 
End bp1281112 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID644972368 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003130216 
Protein GI257052383 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTATC TCCGCGCGGT GTTCACCAAG GACGGCGGGG CGATACATCC CTGGGGAGAG 
ACGTTGGCTC GGGACGAATC GGTGCTTCGG GGGCCGATGT ACGTGATGGA GATGGTCGAC 
GACGAGGTCG CGAAAATGCT CTGCCGGGTC TATGGCGATG TCGAGCATGG CTTTGGGCTA 
ACCCGTGATC ACCCGCTTGT CAGGACTGCA ACGCTTGTGG ACGCTGCTCG TGGGCTGCTC 
TCGTTGCGCG TCGAGATGCC GACCGAACCA CGACAGATGC TCCGGTTCCA GCGAGAGACT 
GACATCATCC TGGTGATGCC CCTCCAGTTT CGCCAGACGG ACGGCGCGCC GGTCGCGACA 
CTACTCGGCG ACGACGAGTC CTTCGACGAC TCACTGGACG CTGTCCCGGC GGCTGTCGAC 
GTCGAACTGC TCGAGACGGG CGAATACGAA CCCGAACCTG ACGATCCGAT TGCGTCCCTG 
ACGCCGACCC AGCAGCGGGT GCTGTTGAGC GCTGTCGAGG AGGGCTACTA CGAGTGCCCG 
CGCGAGGCGA CACAGGATGA GCTGGCCGAT GCTGTCGATC TCGCGCCGGG CACCGTCGGT 
GAACACCTCC GGAAGATCGA GTCGCGAGTG TTCTCACATC TCGTCGAATG A
 
Protein sequence
MRYLRAVFTK DGGAIHPWGE TLARDESVLR GPMYVMEMVD DEVAKMLCRV YGDVEHGFGL 
TRDHPLVRTA TLVDAARGLL SLRVEMPTEP RQMLRFQRET DIILVMPLQF RQTDGAPVAT 
LLGDDESFDD SLDAVPAAVD VELLETGEYE PEPDDPIASL TPTQQRVLLS AVEEGYYECP 
REATQDELAD AVDLAPGTVG EHLRKIESRV FSHLVE