Gene Huta_1304 details

Gene Information

• Locus tag: Huta_1304
• Symbol: cofG
• ID: 8383581
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1276479
• End bp: 1277585
• Gene Length: 1107 bp
• Protein Length: 368 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644972365
• Product: FO synthase subunit 1
• Protein accession: YP_003130213
• Protein GI: 257052380
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.366684
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCCGAA ACCCGGACGT GATCCCCGGG GCCGAGGAAT ACGACGTCGA CGTCACGATC 
GATCCGGCCG AGCGCGAGCG ACTGCTGTCG GTCGGCCCCG AGGACGTCGC CGGACCCGGC 
GAGGACGGCG GCCCCGACCA CCTCTCCTTT GCCAGAAATG TCTTCATCCC ATTGACGACG 
GCCTGCCGGT ACACCTGCAC CTACTGTACG TACTACGATC CGCCGGGCCA GGCCTCGTTG 
CTTTCGCCCG AAGACGTCCG CGAGATCTGC CGGGAGGGGG CCGACGCCGG CTGTACGGAA 
GCCCTCTTTA CCTTCGGCGA CGATCCCGAC GACCGCTACG ACGCAATCTA CGACCAACTC 
GCCGAGTGGG GCCACGACTC GATTCACACC TATCTCCGGG AGGCCTGCGA GATCGCGCTG 
GAGGAGGGAC TGCTGCCCCA CGCCAATCCG GGCGATCAGA CCCGCGAGCA GATGGCCGAA 
GTCGCCGATC TGAACGCGAG CATGGGTGTG ATGCTAGAGA CAACCGCCGA TCTTGAGGCC 
CACTCGGGTT CGCGCCGCAA AGAGCCGGGC CAACGACTCG CAACGATCCG GACGGCAGGG 
GAACTCGGCG TGCCTTTCAC AACCGGGATT CTGGTCGGCA TCGGCGAGGA CTGGGCGGAT 
CGCGCCGAGA GCCTGCTGGC AATCGCTGCC CTCCACGAGC GGTACAACCA CGTCCAGGAG 
GTGATCGTCC AGCCCGTTTC GCCGAACGAA CGCTGGGATC GCGAGCCGCC GAGTCTGGAG 
ACGATGCGCC GGACGGTCGC GATGGCACGG GCGGGATTGC CAGAGACGGT CAGCGTCCAG 
GTCCCGCCGA ATCTGGCCCG GACGCGCGAC CTGCTCGACT GCGGCGTCGA CGATCTTGGC 
GGTGTCTCCC CGGTCACCGA TGACCACGTC AATCCCGACT ACGCCTGGCC GGCACTGGAC 
GAACTCCGCG CGATCGCAGA CGATGCGGGT GTCCCGCTAC GCGAGCGGTT ACCGGTCTAC 
GATCGCTACG TGGACGAAGA CTGGCTGAGC GAGCAGGTAT TGGCAACGGT CTCGACAGTG 
ACATCGACGG ACGAAACAGG GACCTGA 

 

Protein sequence

MIRNPDVIPG AEEYDVDVTI DPAERERLLS VGPEDVAGPG EDGGPDHLSF ARNVFIPLTT 
ACRYTCTYCT YYDPPGQASL LSPEDVREIC REGADAGCTE ALFTFGDDPD DRYDAIYDQL 
AEWGHDSIHT YLREACEIAL EEGLLPHANP GDQTREQMAE VADLNASMGV MLETTADLEA 
HSGSRRKEPG QRLATIRTAG ELGVPFTTGI LVGIGEDWAD RAESLLAIAA LHERYNHVQE 
VIVQPVSPNE RWDREPPSLE TMRRTVAMAR AGLPETVSVQ VPPNLARTRD LLDCGVDDLG 
GVSPVTDDHV NPDYAWPALD ELRAIADDAG VPLRERLPVY DRYVDEDWLS EQVLATVSTV 
TSTDETGT