Gene Huta_1281 details

Gene Information

• Locus tag: Huta_1281
• Symbol: trpD
• ID: 8383557
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1251049
• End bp: 1252059
• Gene Length: 1011 bp
• Protein Length: 336 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644972341
• Product: anthranilate phosphoribosyltransferase
• Protein accession: YP_003130190
• Protein GI: 257052357
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0547] Anthranilate phosphoribosyltransferase
• TIGRFAM ID: [TIGR01245] anthranilate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.850857
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACAC TACAGACACA CATCGAACGC GTCACCGAGG GCGAGGATCT GACGGTCGAA 
CAGGCCAAAG AAGCATCGAG TGCGGTCTTC GAGGACGCGA CGGAGGCCCA GATCGGCGCG 
CTCCTGAGCG CACTCCGGGC GAAAGGCGAG ACCGAGGCCG AGATCGCGGG CTTCGCCCAG 
GGGATGCGCG AGGCCGCCCG GACGATCAAA CCCGATCGCG ACCCGCTGGT CGACACCTGC 
GGGACGGGCG GGGACGACTA CGACACGATC AACGTCTCGA CGACGAGCGC CATCGTCGCC 
GCGGGCGCGG GCGTCCCGAT CGCCAAGCAC GGCAACTATT CGGTCTCCTC CTCCTCGGGC 
AGCGCCGACG TGCTGGAGGA GGTCGGCGTC ACGGTCGACG CCGAACCGCC GGCTGTCGAG 
GACGCCATCG AGGACGAGGG CATCGGGTTC ATGCTCGCGC CCGTCTTCCA CCCGGCGATG 
AAGGCCGTCA TCGGCCCGCG CAAGGAACTC GGCATGCGGA CGATCTTCAA CGTCCTCGGC 
CCGCTCACGA ACCCCGCCGG CGCTGACGCG CAGGTGCTGG GCGTCTACGA CCCCGATCTG 
GTCCCCCTCA TCGCGCGCTC GCTCGCGCAC ATGCCCGTCG AACACGCCCT GGTCGTCCAC 
GGCAGCGGCC TCGACGAGAT CGCCATCCAC GACGAGACGA CCGTCGCCGA AGTGCAGGGC 
GACTCCGTCG AGGAGTATAC CCTCTCTCCG AGTGACCTGG GGCTCGACCG CCACGACATC 
GCCGATGTGG CGGGCGGGAC ACCTGAGGAG AACGCCGAGG CCCTCCGCGG GATCGTCCGC 
GGCGAGGCCA ACGGCGCGAA ACGGGACATC ATCCTCGCGA ACGCCGGCGC GGCGATCTAC 
GTCGCGGGCG AGGCCGACTC TCTCGAGGAC GGCGTCGAGG TCGCCCGCCA GGCGATCGAC 
TCGGGCGCGG CGGGCGAGAA ACTCGCCGGC CTCCGCGGTG TGGTCGCATG A 

 

Protein sequence

MSTLQTHIER VTEGEDLTVE QAKEASSAVF EDATEAQIGA LLSALRAKGE TEAEIAGFAQ 
GMREAARTIK PDRDPLVDTC GTGGDDYDTI NVSTTSAIVA AGAGVPIAKH GNYSVSSSSG 
SADVLEEVGV TVDAEPPAVE DAIEDEGIGF MLAPVFHPAM KAVIGPRKEL GMRTIFNVLG 
PLTNPAGADA QVLGVYDPDL VPLIARSLAH MPVEHALVVH GSGLDEIAIH DETTVAEVQG 
DSVEEYTLSP SDLGLDRHDI ADVAGGTPEE NAEALRGIVR GEANGAKRDI ILANAGAAIY 
VAGEADSLED GVEVARQAID SGAAGEKLAG LRGVVA