| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1209 |
|---|
| Symbol | trkA |
|---|
| ID | 8383484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1181566 |
|---|
| End bp | 1182912 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644972268 |
|---|
| Product | potassium transporter peripheral membrane component |
|---|
| Protein accession | YP_003130118 |
|---|
| Protein GI | 257052285 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.356485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTGA TCGTTGTCGG TGCCGGCGAG GTCGGGTCGA GCATCGCCGA AAGCCTGGCC
GACGAACACG AAGTCGTCGT GGTCGACGTC GACGGTGATC GCGTCGAGGC GCTGACCTAC
GAACTGGACG TCCTGGCGAT CGAGGGCGAC GGCGCAGCGA TCGAGACGTT AGAGGAGGCC
GGCCTCGCGG CGGCCGAGCT GTTGATCGCC GTCACGGACG ACGACGAGAC CAACATCGTC
TCCTGTGGGA CCGCAAAGAC CCTCGACGAC GTCACGACCA TCGCCCGCGT TCGCAATACC
AAGTACTTAG ACACCTGGGA GAACGCCGAG GGGGCGCTCG GCGTCGACGT CATGGTCGGG
ACGAACCTGC TCACCGCCCG GAAGATCGCC AGCATGATCG GCCTCCCGGC CGCCCGGGAC
GTCGACAGCT TCGCCGACGG TACGATCCAG ATGGCCGAGT TCGAACTCGC CACGGGGAGT
CCCGTCGCCG GACAGACCGT CGCCGAGGCC GACCGCTTCG ACGATCTCAC CTTCGCAGCG
ATCCTGTGTC CTGACGACGA CGGCACCTGC GATGAGATCG TCGTTCCGCG GGGGGATACC
CGGCTGTCGG CCGGCGACGA GGTGATCGTC ATCGGGACCG ACGAGGCGGT GACGGCGTTC
AGCCACGCCG TCGCGCCGGA CGACGACTAC CACGACGTGT TGCTCGTCGG CGGGAGCTCA
GTGGGTTACC AGACCGCACG CCTCCTCGAG GGTCGCGGGA TCCGACCGAA GCTGATCGAA
CGCGACCCCG AACGCGCGCA GTTTCTCGCC GAGTCGCTCC CGAAGACGAC GGTCCTTCAA
GCGGATGCTA CCGATCGGGA CTTCCTCGAA AGCGAGAACA TCGACGCCGT CGATGTCGTC
GTCACGACCC TGGAGTCCGA CGAGGCGAAC CTGCTCGCGG GGCTGTTCGC CAAGCGACTG
GGCGCCGATC GGGCGATCGC CGTCGTCGAG GAGGGCTCGT ACGTCGACCT GTTCGAGACC
GTCGGCATCG ACGTGGCCGT CCAGCCCCGC GAGGTGGCTG CCGAGGAGAT CACGCGGTTC
ACCCGCGAGG AACACGCCGA GAACGTGGCG ATCATCGAGA GCGACCGGGC GGAAGTCATC
GAGGTGGAGA TCGACGACGA GAGCGTCTTT CACGACCGGA CCATCCAGTC GGCCGCCGCG
GACCTGCCCG ACGGCGTCGT CGTGGGCGCG ATCGTCCGCG ATGGCGAGTT CGTCCGGCCC
CGTGGGGACA CCGTCGTCCA CGCCGGCGAC CACGTCGTCT TCTTCGTCGA GACGACCGCA
CTCGACGAGA CGCTCGCAAA AATATGA
|
|---|
| Protein sequence | MRVIVVGAGE VGSSIAESLA DEHEVVVVDV DGDRVEALTY ELDVLAIEGD GAAIETLEEA
GLAAAELLIA VTDDDETNIV SCGTAKTLDD VTTIARVRNT KYLDTWENAE GALGVDVMVG
TNLLTARKIA SMIGLPAARD VDSFADGTIQ MAEFELATGS PVAGQTVAEA DRFDDLTFAA
ILCPDDDGTC DEIVVPRGDT RLSAGDEVIV IGTDEAVTAF SHAVAPDDDY HDVLLVGGSS
VGYQTARLLE GRGIRPKLIE RDPERAQFLA ESLPKTTVLQ ADATDRDFLE SENIDAVDVV
VTTLESDEAN LLAGLFAKRL GADRAIAVVE EGSYVDLFET VGIDVAVQPR EVAAEEITRF
TREEHAENVA IIESDRAEVI EVEIDDESVF HDRTIQSAAA DLPDGVVVGA IVRDGEFVRP
RGDTVVHAGD HVVFFVETTA LDETLAKI
|
|---|
| |