| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1197 |
|---|
| Symbol | |
|---|
| ID | 8383472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1171155 |
|---|
| End bp | 1172345 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644972256 |
|---|
| Product | phosphoesterase RecJ domain protein |
|---|
| Protein accession | YP_003130106 |
|---|
| Protein GI | 257052273 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0618] Exopolyphosphatase-related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0927845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTCC CGGGCCCCGC TGTCGGCGGT ACTGTCGCAC AGGCGGGTTT GAGAGACGCA
CTCGATCGCG TCACCGCGGA GCCGTTGCTC GCCGTCGCCG CGGTCGTGGT CGTCCTTGTC
GTGCTCATCG GTCTTGCCTT CTTCGTCCGT CGACAGCGGC GAACGCCTGG CCAACGCCTC
CGCCGGATCC TGGCGGACCA CGATCGGGTG AGCGTCCTGA TGCATCCGAA CCCCGATCCG
GACGCGATGG CGGCCGCCCA GGGCGTCGCC GAACTCGCGG CGGCCGTCGA TACCGAACCG
GCTCTCCAGC ACGCCGGCCA GATCCGCCAT CAGGAGAACC GTGCGTTCGA AACGGTCCTC
GATCTCGATC TCGAACAGAT CGAGACGGCG GGGGACATCG ACGCCGACGC GGTCGTCCTC
GTCGACCACA ACGAAGCGCG CGGATTCCCC GGCGCAGACG GGATCTCACC CGTCGCCGTT
ATCGACCATC ATCCCGGTGA CGGAAACGGA ACGGCGCTCA CTGACGTCCG AACCGAGTAC
GGCGCGTGCG CGACGATCGT CGCCGAGTAC TTCGAAGAGC AGGGGATCGA GCCGGGATCC
ACCGATTCCG ACGGGACCGA GGGTGCATGC ACGCTCTCGC CGCCCGTCGC GACGGGGTTG
CTCTACGGCA TTCAAGCTGA CACCAATCAC CTCACGACAG GGTGTTCTCC GGCCGAGTTC
GTCGCTGCAT CGTATCTCTA TCCGGGGATC GACGAGGAGT TGCTCGATCG CATCGCCAAC
CCGGAGGTCG ATACCGAAGT TCTCGACGTG AAAGCGCGGG CGATCACCGA ACGGGATGTC
CGGGGTGCCT TCGCCTGCAG CGACGTCGGG ACGCTCTCGA ACGTCGATGC CATCCCACAG
GCGGCCGACG AACTCCTCCG ACTCGAAGGC GTGACGGCCA TCGTCGTCCT GGGGGACGTC
GAGGACACAC TCCATCTCTC CGGGCGGTCC CGGGACGACC GTGTTCATAT GGGCAAAGCC
CTCCAGGCCG CCGTCGAGGA CATCCCGATG GCCGAGGCCG GTGGACACGC CCGCATGGGC
GGGGGCCAGG TTAGCGTCGA ACACATGAAC GGCCTCGGGC CGGGCGAGGG CGTGACGCGC
GCGGACCTCC ACGAACGGCT GTTCGAGGCG ATGACCGGTG ATCGGCAGTG A
|
|---|
| Protein sequence | MSVPGPAVGG TVAQAGLRDA LDRVTAEPLL AVAAVVVVLV VLIGLAFFVR RQRRTPGQRL
RRILADHDRV SVLMHPNPDP DAMAAAQGVA ELAAAVDTEP ALQHAGQIRH QENRAFETVL
DLDLEQIETA GDIDADAVVL VDHNEARGFP GADGISPVAV IDHHPGDGNG TALTDVRTEY
GACATIVAEY FEEQGIEPGS TDSDGTEGAC TLSPPVATGL LYGIQADTNH LTTGCSPAEF
VAASYLYPGI DEELLDRIAN PEVDTEVLDV KARAITERDV RGAFACSDVG TLSNVDAIPQ
AADELLRLEG VTAIVVLGDV EDTLHLSGRS RDDRVHMGKA LQAAVEDIPM AEAGGHARMG
GGQVSVEHMN GLGPGEGVTR ADLHERLFEA MTGDRQ
|
|---|
| |