Gene Huta_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1189 
Symbol 
ID8383464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1164079 
End bp1165281 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID644972248 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003130098 
Protein GI257052265 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.051319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCGC TCGCGTCGAT CGGCCGGGAG GCAAAGGCAC TCTGGAGTGA GGGGAGAGGC 
CCCTCGCTCG GAGCCATCGC AGGCACGTGG GGGTTGTTGC TGGGGACGCG GATGATCTAT
CCCGTCCTCC TGCCGGCCCT CCGGGACGAC TTCGGCCTCT CGCTTTCGGT CGCCGGGTTG
CTGGTGACGA TCCTCTGGCT GGGCTCCGCA CTCGGGCAAC TCCCCAGTGG AATACTCGCT
GACCGGTTCA GCGAGCGAAG CGTAATGGCG ACCGGAACGC TGGTGGCCGC GCTGGGCGTC
ACGTTGGTCG TGGCCGCCCC GACGGCCGCT GTCCTGTTCG CCGCCACGGC GCTCGTCGGC
GTCGGGCAGT CGCTGTACCC GATCGCGCGG ATCACGATCC TCACCGACAT GTACCCAGAT
CGGATCGGCA GCGCCCTCGG CGTGACGATG GCGACGGGCG ACCTCGGGCA GACAATCGTG
CCCCCGATCG CCGGCACGCT GGCCGCCGCG ATCGCCTGGC AGGCCGGCTT CGGCATGATG
GTTCCCGGGC TCCTCGTCGG ATCGCTCGCA CTGATGTTGG TCCTCCCCAG CCAGACTGGC
TCGACGGACA CCGGCGGGAC ATCCGACGAC AACAGGCTGG GGGAACTGAT CAGCGATCTG
CGGGAGGGAG ATGTCCTCTT TCTGGCGTTT ATCCTGTTTC TGTACGTCCT CGTCTGGCAA
TCGTTCACGG GGTTCTATCC GACGTACCTC ACCGAGGAAA AGCCCGTCTC CAAGCCGACT
GCCAGCCTGC TGTTCAGCCT GTTTTTTGCC TTCGGCGTCG TGATCAAGCC GGCCGCGGGT
GCCGCCTACG ACCGGATCGG GCCCCGACGC TCGCTGGTCG CAGTGCTGTC CGGTCCAGTG
GTCGGACTCG GCCTGCTCCC GTTCGTCGAC AGTCTCCCGG CACTCGTCGT GATCACGGCC
CTCGTGAGCA CGATGCTCGG GTCGGGTGCC ATCACGCAGT CGTTCCTCTC GGAAGCATTT
TCTGACGAAG CCCGTGGCAC CGGGCTGGGC ATCGTTCGGA CCTCAGCGGC GACGCTCGGT
GCCGCGGGGC CCGTCCTGTT CGGCGTGATC GCCGAACGGG GCTACTTCGA CGAGGGCTAC
TTCCTGCTTG CCGGGCTGAT GGCGGTCATC GTGGTGCTCA CGCTCGTGTT CTTCGAGGAG
TGA
 
Protein sequence
MNPLASIGRE AKALWSEGRG PSLGAIAGTW GLLLGTRMIY PVLLPALRDD FGLSLSVAGL 
LVTILWLGSA LGQLPSGILA DRFSERSVMA TGTLVAALGV TLVVAAPTAA VLFAATALVG
VGQSLYPIAR ITILTDMYPD RIGSALGVTM ATGDLGQTIV PPIAGTLAAA IAWQAGFGMM
VPGLLVGSLA LMLVLPSQTG STDTGGTSDD NRLGELISDL REGDVLFLAF ILFLYVLVWQ
SFTGFYPTYL TEEKPVSKPT ASLLFSLFFA FGVVIKPAAG AAYDRIGPRR SLVAVLSGPV
VGLGLLPFVD SLPALVVITA LVSTMLGSGA ITQSFLSEAF SDEARGTGLG IVRTSAATLG
AAGPVLFGVI AERGYFDEGY FLLAGLMAVI VVLTLVFFEE