| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1175 |
|---|
| Symbol | |
|---|
| ID | 8383450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1149869 |
|---|
| End bp | 1150555 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644972234 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003130084 |
|---|
| Protein GI | 257052251 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTG ACCGACTCCC CACGATCGTC GTGCTCGCCC TCGTCGTGGT TGCGCTGGGT
GCCGCCGCCG CGACGCTGGA CTCCGGACAG TTGCCGACGG ACACGTCCTC TAACGCGTCG
GGTCCGGCGC TGACACCGGA CCCGAGCGGC GGGCCGCGCG ATGCTCCCGA GCGGACCCCA
GTTCCTCCTG CGGATTCCTT CTCCGTCACG TGGTGGACTC CGCCGCTCCC CGCCGTTCTG
GGGGGGCTGA CGCTCGCCCT GGTCGGCGCG CTCGTCTTCC TGTTCGTCCG GACCGGGACG
GGCGATCCGA TCGACGTCGA CGAACCGACC GACCCGGCGG ATGAACCCGA TCTGCAGGCG
GTCGGCGAGG CGGCGGGCAA CGCCGCGGAT CGCATCGAGT CCCGGGCCGA TGTCGACAAC
GAAGTCTACC GGGCGTGGCG CGAGATGGTC CGTCACCTCC CGGTTTCGGA TCCTGAGACC
ACGACCCCCG AGGAGTTCGA GGCGACGGCG GTCGCAGCGG GGATGCGTCC GGACGACGTC
GCGGAACTCA CGCGACTGTT CGCGGAGGTT CGATACGGTG AACGCGATCC GGACGGCCGG
GAGGAACGCG CACTCGACGC GCTCCGGCGG ATCGAGGCCG CCCATGCCGG CGAGGCCGGC
GACGCTTCGG GGGGTGCGAA CGGATGA
|
|---|
| Protein sequence | MARDRLPTIV VLALVVVALG AAAATLDSGQ LPTDTSSNAS GPALTPDPSG GPRDAPERTP
VPPADSFSVT WWTPPLPAVL GGLTLALVGA LVFLFVRTGT GDPIDVDEPT DPADEPDLQA
VGEAAGNAAD RIESRADVDN EVYRAWREMV RHLPVSDPET TTPEEFEATA VAAGMRPDDV
AELTRLFAEV RYGERDPDGR EERALDALRR IEAAHAGEAG DASGGANG
|
|---|
| |