Gene Huta_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1169 
Symbol 
ID8383444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1144489 
End bp1145274 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID644972228 
ProductIndole-3-glycerol-phosphate synthase 
Protein accessionYP_003130078 
Protein GI257052245 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.949378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCCA GTGATGAAAT AGCGCCTGAC GTGCGATCGA TCCTCTCGGC AGCGAGAGAT 
CGTGGCGGCG CGTCCGGGAC GGTCGACGTG ACGGCTCGCT CGCTGTCGGC AGCGTTCGAT
CGCGCCGAGC GCGACGGTCG AGTGCCGACG ATCACCGAAG TCAAGCCGAC GAGTCCAACG
ACCGAGGGCC GACACGACGG CGATCCGGTC GAGCTCGCAA CGGCCATGGT CGAGAACGGG
GCGGCGGCAC TGTCGGTGTT GACCGAACCC GAGCACTTCG GGGGATCGCC CGAGACGCTT
GCCCGCGTCC GGGCAGCCGT CGACGTGCCC ATCCTCCGGA AGGATTTCGT CCTCCACGAG
GCTCAACTCG ACGTGGTCGA GGCCGATCTC GTCCTCCTCA TCGTCCGGTT TCTCGAGGAG
GACGGCACGG ACGACCTCGA AGATCTGATC GACGCCGCGC GCGACCGCGG GTTCCAGGTA
CTCGTCGAGG CACACGCCCG ATCGGAAGTC GCGGCCGCGG TCGACGCCGG CGCGGAGATC
ATCGGCGTGA ACAACCGCGA CCTGGCGAAA CTCGACGTCG ACCTCGAAAC CTTCGAGTCG
GTCGCGCCCG CAGTCGACGA TGATGTGACA TTGATCGCCG AGAGTGGGAT CGAGACGCCG
GCGGATGTCC AGCGGATGCG CGCGGCCGGT GCCGATGGGC TGTTGATCGG CTCGGCGATC
ATGGACGGCG ACGTGGCGGC GAACACGCAA GCACTTACCA CACCGACGGA GACACCCAAC
CAATGA
 
Protein sequence
MDASDEIAPD VRSILSAARD RGGASGTVDV TARSLSAAFD RAERDGRVPT ITEVKPTSPT 
TEGRHDGDPV ELATAMVENG AAALSVLTEP EHFGGSPETL ARVRAAVDVP ILRKDFVLHE
AQLDVVEADL VLLIVRFLEE DGTDDLEDLI DAARDRGFQV LVEAHARSEV AAAVDAGAEI
IGVNNRDLAK LDVDLETFES VAPAVDDDVT LIAESGIETP ADVQRMRAAG ADGLLIGSAI
MDGDVAANTQ ALTTPTETPN Q