Gene Huta_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1158 
Symbol 
ID8383433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1133610 
End bp1134353 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID644972217 
Productprotein of unknown function DUF541 
Protein accessionYP_003130067 
Protein GI257052234 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.38098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCA ATAGATCGAC CCTCCTGGTG GCCGCCGTGG CGGTGTTGTT GCTCGCTGCG 
GTGGGCGCTG CGACGGCCGT CACGCCCGAA GCACAGCCTG ACCAGCCAGC CAAACAGATC
GACGTCGCCG GATCAGCGGA AGTTTCAGCC CAGCCGGATC AAGCCGTGCT CCGACTCGGC
GTCGTTGCAA CTGCCGAGGA TGTCCAGACC GCCCGCGATC AGGTCGCCGA GAACCTCACC
GCCGTCCGTA CCGCACTGAC TGAACTGAAC GTCTCCGAGG ATCAGATCGA GACGGGATAC
TACGACGTCG GCGAGGTTCA CCAGCGTCCC GAAACCGAGA AGACAACCGA GTACCGCGCG
ATCCACACGC TCGAAGTCAC GCTCGATGAT ACCGAGCGTG TCGGCGACGT GATCGACACT
GCCATCGACA GCGGTGCCAA CCGCGTCGAC GGCGTCTCCT TTACGCTCTC AGAGGAGCGG
CGCCACGAGC TTCGCCAGGA CGCCCTCGAA AAGGCGATGG ATCGAGCGCG AACGGACGCG
GACACGCTGG CGAACAGTTC CGGGCTGCAC GTCATCGGTG CGTCCTCGAT AAGCGCCAGT
GACGTCAGCG TCAGTCCCTA CCGCGTCGAG GAAACTATGA TGACCGCCGA TGCCGCAGGC
GGGTCAGCCT CGACCACGAT CGAGAGCGGT CCTGTCGACG TCACTGCGTC GGTTCAGGTC
GTCTATAACG CGACCAGCGC CTGA
 
Protein sequence
MQLNRSTLLV AAVAVLLLAA VGAATAVTPE AQPDQPAKQI DVAGSAEVSA QPDQAVLRLG 
VVATAEDVQT ARDQVAENLT AVRTALTELN VSEDQIETGY YDVGEVHQRP ETEKTTEYRA
IHTLEVTLDD TERVGDVIDT AIDSGANRVD GVSFTLSEER RHELRQDALE KAMDRARTDA
DTLANSSGLH VIGASSISAS DVSVSPYRVE ETMMTADAAG GSASTTIESG PVDVTASVQV
VYNATSA