Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1154 |
Symbol | |
ID | 8383429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 1128149 |
End bp | 1129636 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644972213 |
Product | L-arabinose isomerase |
Protein accession | YP_003130063 |
Protein GI | 257052230 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2160] L-arabinose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.77803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACCCA TCCCGCACGG AACGGACTTC GATGACCTGG AAGTATGGTT CCTCACCGGG AGCCAGCACC TCTACGGCGA GGAGACGCTC GACCTCGTCG CGGAAGACGC TCGCGAGGTC GCCGCCGGAC TCGACGATGA CGACCGGATC CCGGTCAGCG TCGAATTCAA GTCAGTCCTG ACGACGGCCG ACGCCATCGA GTCGGTCGTC AGAGAAGCCA ACGCCAGCGA GGACTGCATC GGCCTCATCA CCTGGATGCA CACCTTCTCG CCGGCGAAGA TGTGGATCCG TGGCCTGCAG GCGCTGGACG TCCCCTTCGT CCACCTCCAC ACCCAGTTCA ACCGCGAGTT GCCCTACGAC GAGATCGACA TGGACTTCAT GAACGCCAAT CAGTCCGCCC ACGGCGGCCG CGAGTTCGGC CACATCGTCT CGCGACTCGA CATCGACCGG AAGGTCGTCG TCGGCCACTG GGAAGACGAC GACGTCCGCG AGCAACTCGA CACCTGGGCT CGCGCGGCTG CCGCACGTCA CGAACTCCGG GGCGCGAAGA TCGCCCGCTT CGGCGACAAC ATGCGCGACG TCGCCGTCAC CGAGGGCGAC AAAGTGTCCG CCCAGATGGC CTTCGGCGCG AGCGTCGACG GCTACGGCCT CGGCGACCTC GTCGAATTCG TCGAGGACGT CACCGAGAGC GAGATCGACG ATCTCCTCGA GGAGTACGAC CAGCAGTACG AACTCGCAGC CGAACTCCAG GCCGACGGCG ACCGACGCGA TTCGCTCAGA GAGGCCGCAC GCATCGAACT CGGAATCAGA GCCTTCCTCG AGGACGGCGA GTTCGTCGGC TTCACCACCA CCTTCGAGAA CCTGACCGGC CTGTCCCAGC TCCCCGGCCT CGCAGTCCAG CGGCTGATGG CCGACGGCTA CGGCTTCGGC CCGGAGGGCG ACTGGAAGTC GGCGCTGTTG ACCCGGGCGA TGAAAGTCAT GGGCCAGGGA CTGAATGGCG GCACATCGCT GATGGAACAC TATACCTACG ATCTTACCGA GGGCGACGAG AAGGTCCTCG GGGCCCACAT GCTCGAGATC TGTGAGTCCA TCGCCGGTGA GCAGCCACGC CTCGAGATCC ACCCGCTCGA CATCGGCGGC AAGGCCGACC CCGTGCGGGC GGTCTTCGAC GCCGACACCG GTCCGGCGAT CAACGCCTCG CTCGTCGACA TGGGCGATCG CTTCCGGCTC ATCACCAACG ACGTCGAGTC GGTCGGGCCG GACGAACCGC TGCCCGAACT CCCCGTCGCG CGGGCGGTCT GGAAACCCGA GCCGGACTTC GAGACCGCCA TCGAGGCGTG GATCAAGGCC GGTGGCGCCC ACCACACAGG CTACAGCCAG GCCGTGACGA ACGAGCACCT CGAAGACTTC GCGTCGATGA CCGGGATCGA GCACCTCCAC GTCGGCGCGG ACACCGACAT CGCGGACGTC GAGCGGAAAC TCTCGTAG
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Protein sequence | MSPIPHGTDF DDLEVWFLTG SQHLYGEETL DLVAEDAREV AAGLDDDDRI PVSVEFKSVL TTADAIESVV REANASEDCI GLITWMHTFS PAKMWIRGLQ ALDVPFVHLH TQFNRELPYD EIDMDFMNAN QSAHGGREFG HIVSRLDIDR KVVVGHWEDD DVREQLDTWA RAAAARHELR GAKIARFGDN MRDVAVTEGD KVSAQMAFGA SVDGYGLGDL VEFVEDVTES EIDDLLEEYD QQYELAAELQ ADGDRRDSLR EAARIELGIR AFLEDGEFVG FTTTFENLTG LSQLPGLAVQ RLMADGYGFG PEGDWKSALL TRAMKVMGQG LNGGTSLMEH YTYDLTEGDE KVLGAHMLEI CESIAGEQPR LEIHPLDIGG KADPVRAVFD ADTGPAINAS LVDMGDRFRL ITNDVESVGP DEPLPELPVA RAVWKPEPDF ETAIEAWIKA GGAHHTGYSQ AVTNEHLEDF ASMTGIEHLH VGADTDIADV ERKLS
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