| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1124 |
|---|
| Symbol | |
|---|
| ID | 8383399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1099350 |
|---|
| End bp | 1100465 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644972185 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003130035 |
|---|
| Protein GI | 257052202 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCGG ATATCCGATA TGCAATTATG GACTCTTCGG ATCGTCATAT TGTCTTGTTC
ATCCCCTCTC TCACATATGG CGGAGCAGAG CAAGTTGCGG TTATTTTGGC TAACGCCTTC
TCACGATCAG GGATCAAAAC TAGCCTTATA ACAGCGACTT CTGGTGACGA TATTTCGGAT
CAGCTCGATG ATTCTGTCAA ACACGCATCT CTAGATCAAT CTCGAGTTCT AACGAGTATT
CCCTACTTTT CGCAATATTT GCGAAAGACG CAACCAGATG CCGTATTGTC GTTTATGACT
CACACAAACG TTGCAGCAAT ACTTGCGAAT GAGATGGCAT ATCAGCCTGC AAAGATTGTG
GTGTCAGAGC ACACCACGAT CTCCAATCGT GAATGTGGAA GGAAGGACCA GCTCATTCTA
TCTGCAGCAG CTCGGTTATA TCCACGAGCG AATCGAGTCG TCGCAGTTTC AAACGGTATC
GCAAGCGAAC TTCAAGACGA TTTGGGATTG AAAGAGGAGT TAATCCAGAC AATCCATAAT
CCGGTCCGCA GACCAGATGA ATCAGATCTT CAATCTCCAC CCAATCCTTG GTTCGAAGAT
TCTGGTCCAG TTTTGTTAGC GGTTGGTAGA CATGAACCTC AAAAGGATTT CTCAACTCTT
CTCCATGCGG TGGCTAAATT CAAGAGTGAC AGAGTCAACA CAAAACTCGT TCTATTGAGC
GAGGGATCGG AGACGCCCAA TCTCAAAAAG TTGGCTGCCA ATCTCGGGAT CGAACAATCC
GTTTCGTTTG AGGGATATGT TAGTGACCCT TATCCATATT TCTCCGCTGC CGACTTGTTC
GTTCTCAGTT CTCGGTGGGA AGGGTTTGGA AACGTGATCG TTGAAGCAAT GATGGTTGGT
ACGCCAGTCG TAGCGACGGA CTGTCCGGTC GGACCAGCAG AGGTCCTTTC TGATGGAGAG
TTTGGGAAAT TGGCTCCAGT CGGGGATCCA GACGGTTTGG CTCATGCGAT TCGTAACGAG
CTCAGAAACC CAACAGACAC AACGAAACTT AGAGAGCGTA GTAAGGAGTT TGATCCTGAT
AGAATTGCAG CAATATATAA ACGAGTGATG TTTTAA
|
|---|
| Protein sequence | MMPDIRYAIM DSSDRHIVLF IPSLTYGGAE QVAVILANAF SRSGIKTSLI TATSGDDISD
QLDDSVKHAS LDQSRVLTSI PYFSQYLRKT QPDAVLSFMT HTNVAAILAN EMAYQPAKIV
VSEHTTISNR ECGRKDQLIL SAAARLYPRA NRVVAVSNGI ASELQDDLGL KEELIQTIHN
PVRRPDESDL QSPPNPWFED SGPVLLAVGR HEPQKDFSTL LHAVAKFKSD RVNTKLVLLS
EGSETPNLKK LAANLGIEQS VSFEGYVSDP YPYFSAADLF VLSSRWEGFG NVIVEAMMVG
TPVVATDCPV GPAEVLSDGE FGKLAPVGDP DGLAHAIRNE LRNPTDTTKL RERSKEFDPD
RIAAIYKRVM F
|
|---|
| |