| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1121 |
|---|
| Symbol | |
|---|
| ID | 8383396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1095930 |
|---|
| End bp | 1097090 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644972182 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003130032 |
|---|
| Protein GI | 257052199 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.606067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG TGTCTTTAGT GGGATACGCG GATATTGGGT CACAGCCTGG ACAAGATTTT
ACCGAATTAG CTAACGCCTT ATTCGATGAA AGAATTCTAT CGCAGGCATA CTGTAGAGGT
ATTGAGGGTA CTGAGTTGCC CGAGGAGCGT GTTACCACAC CAATTCCATT CGGTCGACGT
TTCCCGAGAT TAATCAATGG TATCGGGAGA CATGTTTACG ATATACAGAA CAGATATTAT
TCTGAGTATA TGTTTGACTA TTATTCAGCA AAAAGGATCT CAAAGACGGA CGATATTCAA
CTCCATTTTT CTCCAGGATA TCCAAAAACA TTAGAAAAAG GAAAAGAACA CTCTGATCAA
GTAATAGTAC GAACTGCTAC AGAATATGAA AGAGAAAAAA AGAAGAGATT GGCCCCAGAA
TATAAAAAAT ATACAATTAA TAGCTACCCA ATACCCAAAA AGAGAATAAA AAGAAGAGAG
GAAACGATAA ACAAGGCAGA CAAAGTCATA GCTATCTCAA AATTTGTTAA AGAATCGCTT
ATAAACGGAG GTGTACCGGA AAATAAGATA GATCTTGCTC CGTTTGGAGT GAATTCAGAT
GACTACCCCA CCAAAACTGA AGACATAGAT AAATTCACAG TTTTATTTAT TGGAAGTATA
AATATAAATA AGGGGGTTCC TTACCTTCTT GATGCGTGGC AAAAAAATGG ATGGGAATAT
GATAACGAAG CCCAACTCAT TCTTGGTGGT AGGATCTCTC CAGAATTGGA AGAGATCATT
GAGGAGAAAA ATATAAACAA CCTAAAGACA CCCGGGTATG TTGAACCTCG AAATTACTAC
CAAAATGCGT CCGTGTTTTG CTTTCCTTCC CTTTCGGAAG GATTCGGAAA AGTAATACTT
GAAGCGATGG CCTCAGGACT CCCTGTTATT TCTACAGAAT ATACCGGAGC ACGAGATGTA
ATGACTGACG GTGAGGAGGG ATATATTGTG GAAACTAGAG ATTCAGACGT GATTGCCAAT
AAACTTCAAT ACTTGCGAGA TAATCCAGAA GAAAGAAAAC AGATGGGAGA TAAAGCATTA
CAAACTGCTA AAGAAAACCC ATGGGATAAG CACACTAATA AAATTATTGA TATAATTTCC
GACGATAACA ATTCTAAGTA G
|
|---|
| Protein sequence | MTDVSLVGYA DIGSQPGQDF TELANALFDE RILSQAYCRG IEGTELPEER VTTPIPFGRR
FPRLINGIGR HVYDIQNRYY SEYMFDYYSA KRISKTDDIQ LHFSPGYPKT LEKGKEHSDQ
VIVRTATEYE REKKKRLAPE YKKYTINSYP IPKKRIKRRE ETINKADKVI AISKFVKESL
INGGVPENKI DLAPFGVNSD DYPTKTEDID KFTVLFIGSI NINKGVPYLL DAWQKNGWEY
DNEAQLILGG RISPELEEII EEKNINNLKT PGYVEPRNYY QNASVFCFPS LSEGFGKVIL
EAMASGLPVI STEYTGARDV MTDGEEGYIV ETRDSDVIAN KLQYLRDNPE ERKQMGDKAL
QTAKENPWDK HTNKIIDIIS DDNNSK
|
|---|
| |