| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1097 |
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| Symbol | |
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| ID | 8383371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1074627 |
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| End bp | 1075895 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644972158 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_003130009 |
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| Protein GI | 257052176 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACC AAGATACGGG GGAGCGGACG ACGGTCGATC GTCGGCGGTT TTTGACGATC
GCGGGGGCAA CAGGACTCGC AGCGCTTGCC GGCTGCGAGG AGGATACGAC GACAGAGGGC
GGGGAAACAC CGACGGAAAC GTCGAAACCG TCGGATACAG AGACAGACAC GGAGACGGAA
GCCGACACGG AAACGGAAGC CGAAACTGCG GATGAAACAG AAACCGAAAC GGAGACTGAA
GCGGAAACCG ACACGGAGAC CGAACCGGAA CTGGATCCAG AAGTCCCGCA GTCGGCGAAC
GGGCCGCTGG CTCCATTGCC GACGCCCGAC CGAAACGAGG TCCCGAAGCC GGCGGGGGAT
GCAGGGGGCC TCGAAGTGCT CGACTGGGCC GGATTCGAGG GCGCTGTCAC CTACACGTAC
GACGACGGCC AACCCTCGAA TCTCGAACAC TACAGCGCAC TCGCAAAGAC CGAGATGAAT
ATGACGTTCT ATCTCACCAG CAACGTGAAC TTCGATGGGT ACGAAGGCGG CTGGACGCTG
GCCGCTCAGG ACGGTCACGA ACTCGGGAAC CACACTGTCA GCCATCCCTA CGCCGATATG
AGCGATAGCT CATTCGCCGA GCCAGCGGCG GACCCAGCAG CCGAAATCGA GGGGTGTTCC
CGGTATATCA TCGACAATCT GGGCCAGGAA GACGTCTGGA CGATGGCTGC TCCATTCGGC
GACACCGGCT GGAGTGAGCC GGCCAAGCAG TCCGATCTCT TCCTCAATCG TGGGGTCGGT
GGCGGGGCCG TCGCTCCCAA TGACGACACT GACCCGTACA ACCTGCCGTG TTACATGGCC
CAGGAGGGCG ACACTGCCGG GACCTTCACC GATCTGATAG ACAATGCACG GGACAACGGT
GAGTGGCAAA TCTTCCTGTT TCATACGATC GCTCCGACCG ACGAGGTGTG GTACGCGCCA
GTCGAAGTCG ACGCGATCAT CGACAGTATC GAGCACGCCA AATCCACCGG CGACGTCTGG
ATCGACACGC TTGCCACCGT CGGCGCGTAC TGGCGCGGCC AGCAGATACT GGAATCCGCC
GACGTCACGG AGTCCGACGG GGAAACCGTT TGGTCGTGGA CACTGTCCGA GTCGTTCCCG
GCCGGTCGCC ACGTCCGTGT GACCGTCGAC GGCGGGACGC TCTCCCAGAA CGGCACGGAA
CTGGAGTGGA ACTCCCACGG GTATTACGAG GTCGCGCTGG ACGAGGAGTC CCTGACGCTG
TCGGCATAG
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| Protein sequence | MSDQDTGERT TVDRRRFLTI AGATGLAALA GCEEDTTTEG GETPTETSKP SDTETDTETE
ADTETEAETA DETETETETE AETDTETEPE LDPEVPQSAN GPLAPLPTPD RNEVPKPAGD
AGGLEVLDWA GFEGAVTYTY DDGQPSNLEH YSALAKTEMN MTFYLTSNVN FDGYEGGWTL
AAQDGHELGN HTVSHPYADM SDSSFAEPAA DPAAEIEGCS RYIIDNLGQE DVWTMAAPFG
DTGWSEPAKQ SDLFLNRGVG GGAVAPNDDT DPYNLPCYMA QEGDTAGTFT DLIDNARDNG
EWQIFLFHTI APTDEVWYAP VEVDAIIDSI EHAKSTGDVW IDTLATVGAY WRGQQILESA
DVTESDGETV WSWTLSESFP AGRHVRVTVD GGTLSQNGTE LEWNSHGYYE VALDEESLTL
SA
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