Gene Huta_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1085 
Symbol 
ID8383359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1058937 
End bp1060496 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content63% 
IMG OID644972146 
Productprotein of unknown function DUF58 
Protein accessionYP_003129997 
Protein GI257052164 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTAAAC GACTCACCCT CGCGTTTTTC GTGAGCAGGC CGAGGGCTTT CGACGTAGAA 
CAGATCGATA GCCCAGACAC CAACACCTTC AATGTCGTCT CCGACAACGC CTGTATAATG
CGAGCCACGC GTCGATTCTG GGCCAGCAGT GCGACGATCC TCGCCCTCGC AGGGCTGGCA
CTCCTCTACA CCGCCCCCAC ACTCCTTGCA GGCGTCGTCC TCCTCTCGGC GTGGCTGCTG
ACCGAACAGT TTCGCTTCGC CCGCCGTGCA GCCCACACGA TCGACACAAC GACAATCACA
CAAACACTCC CACAGCAACG CGTCGCCGTC GAATCGTCGA CAACAGTCAC ACTCACCGTG
CAGCGAGAGT CCACAGCGCT GGACATGGAG ATCATCCCAC AAGTACCAAC CGGCGCACGC
GGTACCCCAC AACCACTTAC CCTGGACCCG ACCGACCACG ACGCAGAGAC GACCGACGAC
CTCTCCTGGC CGATCGCCGG CGCGTTCACC CTTCCGAAAC CCACCATCAC ACTCCGCGAC
CGGTTTGGCC TCTTCGAAGA GACGCTTACG CTCGGGACCA CACCCGACCT CGTCGTCGAG
CCACATGCCC CCCGGAACCT CCATGTCGGG GCCGGTGGCG ACGAGATCGC CGCGACCTAC
GGCAGCCATA GTGCCCAGCG CGGCGGCAGC GGCCTCGACC CGGCGGAACT CCGCAAGTAC
GTGCCTGGCG ATCCCTCGAA CCAGATCGAC TGGAAGGCGA CAGCCAGACT CAACGAGACG
TACGTCCGGG AGTTCGAGGC CCAGACCGAT CGCGAGACGA TGCTGGTCGT CGATCATCGC
GACTCGCTCG CTGACGGCGA CGAGGGCCAG ACGAAGTTCG CGTACCTGCG GGAGGTGCTG
CTGGCGATGA CCGACGTCGC CGAGGGCCTC GACGATCCAC TCGGGATCAC GGCGATCGAC
GACGACGGAA TTACCGCACA AATCGACCCA TCCCAGACAC GCAATCAGTA CGAATCAGTC
CGGACTCGAC TGCACGAACT CACGCCGACA GGGAGCCAGT CCCACGGCGA TCAGAGACAG
CAGACCGCCA CACAGGCGAC ACGAGCGAAT ACAGTCGGGA CGGTGCTACA GGGTGACACG
ACAGAGTACG GAACGACACT GCAGCCGTAT TACGCCTCAC GCAAAACCCA CGTCGAACGT
GTCACCGACG AGCCGTTGTT CCACGCAGTC AATCAGCTGA GCGACAGCGA ACCAACGCGG
CTCCTCGTCG TCGCAACTGA TGACACACAC CGACGGGAAC TCCAGGAGGC GGTGAAGCTC
GCGGTCCAGC GCGGCAACCA GGTTGTTGCC TTTTTGACTC CGAACGCTCT CTTCGAGAGG
TACGCACTCG CAGATATGGA GGCGACCTAC GAAGCATACG TGTCCTTCGA AGAGTTTCGT
CGTACACTCG ATCGGCTCCC ACGCACGCGG GTCTTCGAGG TTGGGCCAGG TGATCGGATC
GACGCCGCAT TGCGTGCCGG CCGCACACGA CGCGGCGGGG AGGTGGCCCA TGAGTCATAG
 
Protein sequence
MAKRLTLAFF VSRPRAFDVE QIDSPDTNTF NVVSDNACIM RATRRFWASS ATILALAGLA 
LLYTAPTLLA GVVLLSAWLL TEQFRFARRA AHTIDTTTIT QTLPQQRVAV ESSTTVTLTV
QRESTALDME IIPQVPTGAR GTPQPLTLDP TDHDAETTDD LSWPIAGAFT LPKPTITLRD
RFGLFEETLT LGTTPDLVVE PHAPRNLHVG AGGDEIAATY GSHSAQRGGS GLDPAELRKY
VPGDPSNQID WKATARLNET YVREFEAQTD RETMLVVDHR DSLADGDEGQ TKFAYLREVL
LAMTDVAEGL DDPLGITAID DDGITAQIDP SQTRNQYESV RTRLHELTPT GSQSHGDQRQ
QTATQATRAN TVGTVLQGDT TEYGTTLQPY YASRKTHVER VTDEPLFHAV NQLSDSEPTR
LLVVATDDTH RRELQEAVKL AVQRGNQVVA FLTPNALFER YALADMEATY EAYVSFEEFR
RTLDRLPRTR VFEVGPGDRI DAALRAGRTR RGGEVAHES