Gene Huta_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1078 
Symbol 
ID8383352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1054944 
End bp1055459 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content57% 
IMG OID644972141 
Producttranscriptional regulator, TrmB 
Protein accessionYP_003129992 
Protein GI257052159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAA GCGATGCAGA CTGGGATGCG CCACTTGATA TGGGTGGCGA GGCGTTCGAG 
CTTCTCAGAA GCCCTCGCAA GGCATGGATC TACACCTATG TTCACCATCA CTCGGCGACG
ACGGTCCAGG AGATCGTCGA AACGCTTGAG CTCCCACAGC GTACTGTCTA CGACTATATC
GACGACCTCG AAGCCGCGGA CTTACTCGAG CAGTCCAACG ACGGACGACC GGCGGAATAT
ACAGCTCACG AGATCGACCT CCAATTGGTT GCAGGCGATG CCGAACAACG AATCACAGTG
GCGTTAGTCG AGGCGGTTGC CCGTCGGATA CGGGACGACG ACATCGATAC GTACATCGAT
CGACATGGAC TTGATGGACT CGCCGTCGCA CTCGAATACG CTCACGAGTA CGCCGACGGC
GCTGTGACGC ATCACATCAT GGCTCGTGAA CAAGCACTCT CTCCACTGGA AGCAGGCGTC
ATTCTTGACG CACTCCGCCC GATCATCGAG GATTGA
 
Protein sequence
MATSDADWDA PLDMGGEAFE LLRSPRKAWI YTYVHHHSAT TVQEIVETLE LPQRTVYDYI 
DDLEAADLLE QSNDGRPAEY TAHEIDLQLV AGDAEQRITV ALVEAVARRI RDDDIDTYID
RHGLDGLAVA LEYAHEYADG AVTHHIMARE QALSPLEAGV ILDALRPIIE D