| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1074 |
|---|
| Symbol | |
|---|
| ID | 8383348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1050541 |
|---|
| End bp | 1051362 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644972138 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_003129989 |
|---|
| Protein GI | 257052156 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTTCGG AATTCCGTCT CTTCACCCGT GTTACGGTCG CTAAGGCTAA ATCAGTTGTC
GCTAACCCGG ACGAACCCGC CGACCCCGAA GGGGGTGGCG GGTTCGCCGA GTGGGCGATG
CTCACGCTGC ATGCACTCCG CATCGAGCTG GGCAAATCCT ACCGCGCCGC GGTGGATTTG
CTCAGCGAGA TGCCAGGCGT CCTCGAAGAA ATCGGCCTCA CGCGACTGCC TCACTACACG
GTTCTCCGCA CGTGGTTTGC CCGGATTCCG ACTACAACGT GGCGTGCGTT TCTCGGCGCG
TCAGCCGAGA AACGCACTGG CCACGCTGCT ATCGATTCGA CTGGCTTCGA CCGCGATCAG
CCGAGCCGTC ACTACGCCAA CCGCACGAAC TACCGCGTTC GAGCGCTGAA AGTCACTGCT
CTCGTGGATG TCGAAACGCT GTACATCACC GACATCCACT CGACGACCTC GAAGAAACAC
GATGCGAAGA TCGGCCCGCA GGTCGCCCGG CGCAACGCCG GCGACCTGCG GAGCCTCGCT
GCTGACCGAG GCTATGACGC GAAAACCTTC CGCGACGAAC TCCGTGAGAA CGGTATCAGA
CCGCTGATCA AGCACAGGAT CATGAACCCG CTCGATCACG CGCATAACGC CCGCATGGAC
GGTGATCGGT ATCATCAGCG CTCCATGTCA GAAACCGTCT TCTCCTCGAT CAAGCGCACG
CTCGGCGCTG CCGTGCGTGC GCGCAGCTGG TGGCTGGAAT TCCGTGAAAT GCTGTTGAAA
GCGACCGTCT ACAACCTTCG CCGAAGCGTG AGATATCCGT GA
|
|---|
| Protein sequence | MTSEFRLFTR VTVAKAKSVV ANPDEPADPE GGGGFAEWAM LTLHALRIEL GKSYRAAVDL
LSEMPGVLEE IGLTRLPHYT VLRTWFARIP TTTWRAFLGA SAEKRTGHAA IDSTGFDRDQ
PSRHYANRTN YRVRALKVTA LVDVETLYIT DIHSTTSKKH DAKIGPQVAR RNAGDLRSLA
ADRGYDAKTF RDELRENGIR PLIKHRIMNP LDHAHNARMD GDRYHQRSMS ETVFSSIKRT
LGAAVRARSW WLEFREMLLK ATVYNLRRSV RYP
|
|---|
| |