Gene Huta_1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1057 
Symbol 
ID8383331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp1030290 
End bp1030913 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content52% 
IMG OID644972122 
Producttranscriptional regulator, TrmB 
Protein accessionYP_003129973 
Protein GI257052140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.607328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTACG ATACCGAGCA TGTACGAAAC GCAGCGGATC CGCCAGGGAT AATCACTGGT 
ATTCCAACGT TTGCCGAATT ACTCGATAAT GCCGCACTAG CTGGTCTCTA CACTACAATA 
AGACAGTCTT CGACCGCAAC TGGTCCTGAA CTCGTCAAAA CTTCGGACGT CTCGAAGAAG 
ACAGTATACG ACTATCTACA CAAATTGGAG CGAGCCGGCT TGATACGGAA GACCGGCGAT 
GATGGGGGCA CTGCCAGATA CGTCGCTGAA GGGTTCGAAC TGACAGTGAC AGTCCGTGAA 
ACAGCAGTGA CAATCACACC GGAACTTATC GAGGTCATCG CCCACAGGAA CGACTACCCG 
CCTATCGAGC GTGTGCTCAA CGAGCGCGGA ATCACCACGT TCGCTCTCGT TTACGATCTC 
GTCAAAGCAC ATAGTGAGGG CGACGTCACA ATTCGGCAAA TCGCCGATCT CACGGACCTC 
GCTCCGGGAA CGACATATGA TCTCGTTGAC GCGCTCTATT CGGTTCTCTC GCTTGGTGAC 
GATGAATCGA GTCCGACGAC ATATACGCCA GCTGATTTCG ATGCGGAAGG AAACGATTTG 
CTTGTGGAAA TGGACGACGA GTGA
 
Protein sequence
MSYDTEHVRN AADPPGIITG IPTFAELLDN AALAGLYTTI RQSSTATGPE LVKTSDVSKK 
TVYDYLHKLE RAGLIRKTGD DGGTARYVAE GFELTVTVRE TAVTITPELI EVIAHRNDYP 
PIERVLNERG ITTFALVYDL VKAHSEGDVT IRQIADLTDL APGTTYDLVD ALYSVLSLGD 
DESSPTTYTP ADFDAEGNDL LVEMDDE