Gene Huta_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1042 
Symbol 
ID8383315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1008126 
End bp1008593 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content61% 
IMG OID644972106 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003129958 
Protein GI257052125 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATG CCGTGATTGT CAAATACTGG ATCACCATGG ACCATCCGAA CGAAGAACTG 
ATGCGGACGG CAATCTCGCT CGGTACCGAT CCAGAGGCCG TCGGTGCGCT GCTCGTCAAG
AACGGCGATA TCGTCGCCAG CGGTACCGGC GCGATCTTCG AACGGCCCGA CGCGACCGCT
CACTCGGAGA TCGAAGTGAT CCGTGAGGCG TGCCAACGAC TCGACTCCGA ACGGCTGGAC
GGCTGCTGGC TGTACTCGAC CCACGAACCG TGTCCGATGT GTACGGCTGC GTGTTGCTGG
GCCCGTATCG AGGGCGTCGT CTACGCTCTG ACGGACGAGG ACATGCCTGC TGACTGGGGG
ACGATTTTCT CCGCCGTGTC CGCACGCGAG ATTCGTGACA GCTGTGAGCA TCGGCCGGAA
CTCCATGACG GATTCATGCA CGCGGAAGCG ACTCGGCTTC TTCACTGA
 
Protein sequence
MIYAVIVKYW ITMDHPNEEL MRTAISLGTD PEAVGALLVK NGDIVASGTG AIFERPDATA 
HSEIEVIREA CQRLDSERLD GCWLYSTHEP CPMCTAACCW ARIEGVVYAL TDEDMPADWG
TIFSAVSARE IRDSCEHRPE LHDGFMHAEA TRLLH