| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1041 |
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| Symbol | |
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| ID | 8383314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1007358 |
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| End bp | 1008071 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644972105 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_003129957 |
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| Protein GI | 257052124 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTTGT TACGCCCCCT CCTACGAAAC AATGTGGATC AGGAGACCAT CATCGTGGAA
CTCGACGTCA CCTCGCCGCA GGTCGTGCTC GGCCCAACGC TCGCGAGCGA CCTCGACGTC
ACCGTCTACG CGGAACGATT GCCGGTCTCT CACGAGGGGA CGACCTGGTT TCAGGTGACA
GTCCTGGCTG CCGACTTCGA CGCGTTCGAG GACGCGCTCG CCGCGGACCC GACTGTCGCC
GACAGCGAGG TGTTCGCGGC GTACGGCGAC CGGCGGACGT ACCGGCTCAC GATCGCCCCC
GACGTCCCCG TGATGACCGA ACACGTCGCC AGCTTCGGCG ACGAACTGCT TGACCTCCGT
TCGACCGCGG ACGGCTGGCG CGTCCGCATT CGGACGACCG ACCGCGCCTC GATCCGCGAA
TTTCTGGCGT TCTGTGCCGA GCAGGACATT GACTGCCGAC TCGCTCGGGT CTTCGAAGCG
AGCGATCCGG TCGGCGAAAT CGCGATGCCC GTCGAACGCG ACGCTTTCGA GCTTCTGGCC
ACGGCCTTCG AGGCGGGCTA CTTCGAAGTC CCCCGGGCAA CCTCCCTTGC CGACCTCGCC
GAGCACTTCG ACGTCTCCGA ATCGACGATG TCGGTCCGAC TCCGGCGGGC GCTCGGTCAC
GTCGTCGGGA GTCTTGTCGC CGACGTGCCT TCCGACTCCG CGGAAACCGA GTGA
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| Protein sequence | MGLLRPLLRN NVDQETIIVE LDVTSPQVVL GPTLASDLDV TVYAERLPVS HEGTTWFQVT
VLAADFDAFE DALAADPTVA DSEVFAAYGD RRTYRLTIAP DVPVMTEHVA SFGDELLDLR
STADGWRVRI RTTDRASIRE FLAFCAEQDI DCRLARVFEA SDPVGEIAMP VERDAFELLA
TAFEAGYFEV PRATSLADLA EHFDVSESTM SVRLRRALGH VVGSLVADVP SDSAETE
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