| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1026 |
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| Symbol | |
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| ID | 8383299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 991630 |
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| End bp | 993429 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644972090 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003129942 |
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| Protein GI | 257052109 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0934785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCTG ACGACGAAGT TGCCCGGAAA GCCTTCGAGA AGGCAGCCAC GATCATGCTC
GTGCTGGACA TCGAGGGAAC GATCCAGCGC ATCAACGACC GCGGGTGTGC GGTCCTCGGG
TACGATCGCG ACGAACTGCT CGGTTCGGAC TGGTTCGAGA CCGTCGTCCC CGAGGAGAGT
GACGTGGGTC TGCCGGCGGT TCTCGACGGC CTCAGAGACG ACGACGAGTT CGACGTCCAC
GAGAACACGG TCCGGACCGT GGACGGCGAG ATCCGACGCA TCAAGTGGCA CGTCACCGGG
CTTCGCGACG ACGCCGGCGA GGTCACGCAC CTGCTCGTCT CCGGGTCGGA CGTCACCGAG
CGGGCCGAAA CCGAGCGACG CCTCCGCCGG TACGAACAGA CCGTCGAGAG TTCGACCAAT
CAACTCGCAG TCGTCGACCG GGAGTACACC TACGAGTTGG CCAACCGAAA CTACCGGCGA
TTCCACGGCC TGGGCGAGGA GATCCCGGCT GAACTGACGA TCGCGGACGT CTACGGGACC
GAAACCTTCG AAGCGATCAA GCCCGCTGTC GACCGGGCGC TGGCCGGCGA ATCGCTGGCC
TACGAGATCA CGCGTCCCGG CCCGGACGGC GACGATCGCA CGTTCGACGT CCGGTACTTC
CCGCTCGTGG CTGACGACGA CACGGTGGAG GGTGCCGTCG CCGCGTTGCG GGAGGTCACC
GAACAGCGGG CACGCGAGCG CGAGCGTCGG GAAACCAGAG ACACCTTCGA AGGCCTGTTC
CACGGGATCA ACGACGCCGT TTTCGTTCAC GATTTCGACG GTCAGTTTCT CGCCGTCAAC
GAGACAGCCC GTGAGCGGCT CGGATACGAC GAGGGTGAAC TGCTCGGTAT GACTCCCCAT
GATATCACTG CCGGCCAGCT GACGGGCCAG ATCAGTGAAG CGGTCGAGAC GATCCGGGAC
GAGGGTGAGT TGACATTCGA GACCGTCCAC CTCACGACGT CCGGCGAGCA AATCCCGGTC
GAGATCACGT CGAGTCTGGT GTCGTACTTC GGCGAGGAGG CCGTCTTGAG CGTCGCCAGG
GACATCACTG CTCGGAAGGA GCGGGAACGA CAGCTCGAAC TGGAGGTTGA CCGACTCGCG
GAGTTCGCCG GCGTCATCTC TCATGACCTC CGAAATCCGC TGAACGTCGC CCAGAGCCGA
ATCACGCTGG CGGCTGAGGA GTGTGGCGAC GACCACGAGC ACATCGCCCC TGTCGTCAAC
GCATTGGATC GCATGGAGTC GATCATCGAG GACACGCTCA TGCTCGCCCG GCAAGGCGAG
ACCGTCGGCG AGACCGAAGC GGTCGCCATC GCGGACCTCG TCGGGCAGTG CTGGGACGCG
GTGACGACGG GGGAGACAAC CCTCGAGATC GCCGACAAGT TCTCCCTGCG AGCTGACCGC
GACCGTCTCC AGCACGTTTT CGAGAACCTC TTCCGGAATG CCGTGGAACA TGCTTCCAGG
ACCCCTCACT CGTCTTCGAC TCCCAGAGAT GCGATCGAGC GCGCTGGCGA GGCCGTGACG
ATCAGCGTCG GTCGGCTCGG GGACGACGGT TTCTACGTCG AAGACGACGG CCCCGGAATT
CCCGCGGCCG ATCACGAGAC TGTTTTCGAG CCCGGGTTCT CGATCCAGGA CGAGGGAACG
GGCTTTGGGT TGACCATCGT CCGTCAGATC GCCGAGGCCC ATGGGTGGAC CGTTGACGTG
ACAGACGGGG CGGCCGGTGG CGCGCGCTTT GAGTTCACTG GTGTCGACAT TGTCGAATGA
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| Protein sequence | MASDDEVARK AFEKAATIML VLDIEGTIQR INDRGCAVLG YDRDELLGSD WFETVVPEES
DVGLPAVLDG LRDDDEFDVH ENTVRTVDGE IRRIKWHVTG LRDDAGEVTH LLVSGSDVTE
RAETERRLRR YEQTVESSTN QLAVVDREYT YELANRNYRR FHGLGEEIPA ELTIADVYGT
ETFEAIKPAV DRALAGESLA YEITRPGPDG DDRTFDVRYF PLVADDDTVE GAVAALREVT
EQRARERERR ETRDTFEGLF HGINDAVFVH DFDGQFLAVN ETARERLGYD EGELLGMTPH
DITAGQLTGQ ISEAVETIRD EGELTFETVH LTTSGEQIPV EITSSLVSYF GEEAVLSVAR
DITARKERER QLELEVDRLA EFAGVISHDL RNPLNVAQSR ITLAAEECGD DHEHIAPVVN
ALDRMESIIE DTLMLARQGE TVGETEAVAI ADLVGQCWDA VTTGETTLEI ADKFSLRADR
DRLQHVFENL FRNAVEHASR TPHSSSTPRD AIERAGEAVT ISVGRLGDDG FYVEDDGPGI
PAADHETVFE PGFSIQDEGT GFGLTIVRQI AEAHGWTVDV TDGAAGGARF EFTGVDIVE
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